Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
CFTRP13569 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
CFTRP13569 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
CFTRP13569 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
CFTRP13569 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
CFTRP13569 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
CFTRP13569 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
CFTRP13569 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC27.83■■■□□ 2.05
CFTRP13569 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC27.83■■■□□ 2.04
CFTRP13569 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC27.83■■■□□ 2.04
CFTRP13569 AGER-203ENST00000375065 665 ntTSL 2 BASIC27.83■■■□□ 2.04
CFTRP13569 TOMM22P5-201ENST00000416399 439 ntBASIC27.83■■■□□ 2.04
CFTRP13569 KRT8P13-201ENST00000463294 1010 ntBASIC27.83■■■□□ 2.04
CFTRP13569 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC27.83■■■□□ 2.04
CFTRP13569 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC27.83■■■□□ 2.04
CFTRP13569 AC079316.1-201ENST00000548397 411 ntBASIC27.83■■■□□ 2.04
CFTRP13569 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC27.83■■■□□ 2.04
CFTRP13569 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC27.83■■■□□ 2.04
CFTRP13569 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC27.83■■■□□ 2.04
CFTRP13569 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC27.83■■■□□ 2.04
CFTRP13569 AC005252.2-201ENST00000624630 1141 ntBASIC27.83■■■□□ 2.04
CFTRP13569 AC008687.7-202ENST00000637404 953 ntBASIC27.83■■■□□ 2.04
CFTRP13569 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
CFTRP13569 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
CFTRP13569 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC27.82■■■□□ 2.04
CFTRP13569 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC27.82■■■□□ 2.04
CFTRP13569 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
CFTRP13569 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC27.82■■■□□ 2.04
CFTRP13569 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC27.82■■■□□ 2.04
CFTRP13569 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
CFTRP13569 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
CFTRP13569 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
CFTRP13569 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
CFTRP13569 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC27.82■■■□□ 2.04
CFTRP13569 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
CFTRP13569 AC010328.2-201ENST00000597698 1111 ntBASIC27.82■■■□□ 2.04
CFTRP13569 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC27.82■■■□□ 2.04
CFTRP13569 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC27.82■■■□□ 2.04
CFTRP13569 RHOXF1P1-202ENST00000635473 501 ntBASIC27.82■■■□□ 2.04
CFTRP13569 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC27.82■■■□□ 2.04
CFTRP13569 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC27.82■■■□□ 2.04
CFTRP13569 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC27.82■■■□□ 2.04
CFTRP13569 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC27.81■■■□□ 2.04
CFTRP13569 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC27.81■■■□□ 2.04
CFTRP13569 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC27.81■■■□□ 2.04
CFTRP13569 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC27.81■■■□□ 2.04
CFTRP13569 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
CFTRP13569 ZBTB12BP-201ENST00000314232 1122 ntBASIC27.81■■■□□ 2.04
CFTRP13569 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC27.81■■■□□ 2.04
CFTRP13569 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC27.81■■■□□ 2.04
CFTRP13569 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC27.81■■■□□ 2.04
CFTRP13569 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
CFTRP13569 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC27.81■■■□□ 2.04
CFTRP13569 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC27.81■■■□□ 2.04
CFTRP13569 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC27.81■■■□□ 2.04
CFTRP13569 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC27.81■■■□□ 2.04
CFTRP13569 RN7SL560P-201ENST00000577943 264 ntBASIC27.81■■■□□ 2.04
CFTRP13569 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
CFTRP13569 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC27.81■■■□□ 2.04
CFTRP13569 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
CFTRP13569 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC27.8■■■□□ 2.04
CFTRP13569 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CFTRP13569 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CFTRP13569 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC27.8■■■□□ 2.04
CFTRP13569 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC27.8■■■□□ 2.04
CFTRP13569 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC27.8■■■□□ 2.04
CFTRP13569 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CFTRP13569 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC27.8■■■□□ 2.04
CFTRP13569 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC27.8■■■□□ 2.04
CFTRP13569 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC27.8■■■□□ 2.04
CFTRP13569 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC27.8■■■□□ 2.04
CFTRP13569 AL049840.4-201ENST00000602422 811 ntBASIC27.8■■■□□ 2.04
CFTRP13569 AC106872.11-201ENST00000605838 421 ntBASIC27.8■■■□□ 2.04
CFTRP13569 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
CFTRP13569 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC27.8■■■□□ 2.04
CFTRP13569 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CFTRP13569 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CFTRP13569 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
CFTRP13569 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
CFTRP13569 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CFTRP13569 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC27.79■■■□□ 2.04
CFTRP13569 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC27.79■■■□□ 2.04
CFTRP13569 GATB-213ENST00000515812 1893 ntTSL 5 BASIC27.79■■■□□ 2.04
CFTRP13569 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CFTRP13569 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC27.79■■■□□ 2.04
CFTRP13569 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC27.79■■■□□ 2.04
CFTRP13569 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC27.79■■■□□ 2.04
CFTRP13569 TARDBPP1-201ENST00000442013 1203 ntBASIC27.79■■■□□ 2.04
CFTRP13569 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC27.79■■■□□ 2.04
CFTRP13569 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC27.79■■■□□ 2.04
CFTRP13569 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC27.79■■■□□ 2.04
CFTRP13569 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC27.79■■■□□ 2.04
CFTRP13569 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CFTRP13569 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC27.79■■■□□ 2.04
CFTRP13569 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CFTRP13569 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC27.79■■■□□ 2.04
CFTRP13569 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC27.79■■■□□ 2.04
CFTRP13569 GRN-214ENST00000589265 1632 ntTSL 5 BASIC27.79■■■□□ 2.04
CFTRP13569 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC27.79■■■□□ 2.04
CFTRP13569 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC27.79■■■□□ 2.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms