Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
P04436 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
P04436 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
P04436 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
P04436 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.14■□□□□ 0.01
P04436 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P04436 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P04436 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P04436 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.14■□□□□ 0.01
P04436 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P04436 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
P04436 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.14■□□□□ 0.01
P04436 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.14■□□□□ 0.01
P04436 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
P04436 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.14■□□□□ 0.01
P04436 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.14■□□□□ 0.01
P04436 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.14■□□□□ 0.01
P04436 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.14■□□□□ 0.01
P04436 PRYP6-201ENST00000514804 343 ntBASIC15.14■□□□□ 0.01
P04436 AC105233.2-201ENST00000523697 349 ntBASIC15.14■□□□□ 0.01
P04436 AF228730.5-201ENST00000530288 346 ntBASIC15.14■□□□□ 0.01
P04436 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
P04436 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.14■□□□□ 0.01
P04436 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.14■□□□□ 0.01
P04436 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P04436 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
P04436 AP000842.3-202ENST00000569238 1080 ntBASIC15.14■□□□□ 0.01
P04436 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.14■□□□□ 0.01
P04436 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.14■□□□□ 0.01
P04436 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.14■□□□□ 0.01
P04436 AC020765.3-201ENST00000613051 740 ntBASIC15.14■□□□□ 0.01
P04436 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.14■□□□□ 0.01
P04436 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.14■□□□□ 0.01
P04436 AC105020.1-201ENST00000435356 2205 ntBASIC15.14■□□□□ 0.01
P04436 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.14■□□□□ 0.01
P04436 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P04436 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.14■□□□□ 0.01
P04436 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
P04436 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
P04436 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.14■□□□□ 0.01
P04436 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
P04436 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
P04436 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
P04436 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.14■□□□□ 0.01
P04436 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.14■□□□□ 0.01
P04436 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
P04436 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
P04436 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P04436 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P04436 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
P04436 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.13■□□□□ 0.01
P04436 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P04436 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.13■□□□□ 0.01
P04436 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
P04436 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
P04436 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
P04436 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
P04436 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
P04436 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
P04436 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
P04436 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.13■□□□□ 0.01
P04436 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.13■□□□□ 0.01
P04436 FAM58DP-201ENST00000428076 619 ntBASIC15.13■□□□□ 0.01
P04436 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.13■□□□□ 0.01
P04436 FAM86GP-201ENST00000448322 971 ntBASIC15.13■□□□□ 0.01
P04436 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.13■□□□□ 0.01
P04436 HLA-J-202ENST00000469281 1241 ntBASIC15.13■□□□□ 0.01
P04436 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.13■□□□□ 0.01
P04436 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.13■□□□□ 0.01
P04436 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.13■□□□□ 0.01
P04436 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.13■□□□□ 0.01
P04436 AC109322.1-201ENST00000524499 1264 ntBASIC15.13■□□□□ 0.01
P04436 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P04436 RFPL4AP1-201ENST00000530883 850 ntBASIC15.13■□□□□ 0.01
P04436 SLC25A39P2-201ENST00000537614 270 ntBASIC15.13■□□□□ 0.01
P04436 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.13■□□□□ 0.01
P04436 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
P04436 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
P04436 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.13■□□□□ 0.01
P04436 AC106028.4-201ENST00000614509 607 ntBASIC15.13■□□□□ 0.01
P04436 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P04436 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.13■□□□□ 0.01
P04436 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
P04436 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P04436 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.13■□□□□ 0.01
P04436 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.13■□□□□ 0.01
P04436 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
P04436 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.13■□□□□ 0.01
P04436 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
P04436 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P04436 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
P04436 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
P04436 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
P04436 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
P04436 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
P04436 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
P04436 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.12■□□□□ 0.01
P04436 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.12■□□□□ 0.01
P04436 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
P04436 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms