Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.75■□□□□ 0.75
COL1A1P02452 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL1A1P02452 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC19.75■□□□□ 0.75
COL1A1P02452 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC19.75■□□□□ 0.75
COL1A1P02452 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
COL1A1P02452 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL1A1P02452 IMPDH1P4-201ENST00000445028 1534 ntBASIC19.74■□□□□ 0.75
COL1A1P02452 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
COL1A1P02452 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
COL1A1P02452 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL1A1P02452 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL1A1P02452 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL1A1P02452 ARSEP1-201ENST00000420443 635 ntBASIC19.74■□□□□ 0.75
COL1A1P02452 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC19.74■□□□□ 0.75
COL1A1P02452 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC19.74■□□□□ 0.75
COL1A1P02452 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
COL1A1P02452 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC19.74■□□□□ 0.75
COL1A1P02452 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC19.74■□□□□ 0.75
COL1A1P02452 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL1A1P02452 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL1A1P02452 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL1A1P02452 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL1A1P02452 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL1A1P02452 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
COL1A1P02452 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
COL1A1P02452 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL1A1P02452 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL1A1P02452 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL1A1P02452 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL1A1P02452 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL1A1P02452 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL1A1P02452 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
COL1A1P02452 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL1A1P02452 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC19.74■□□□□ 0.75
COL1A1P02452 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
COL1A1P02452 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
COL1A1P02452 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL1A1P02452 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC19.73■□□□□ 0.75
COL1A1P02452 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL1A1P02452 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC19.73■□□□□ 0.75
COL1A1P02452 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC19.73■□□□□ 0.75
COL1A1P02452 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC19.73■□□□□ 0.75
COL1A1P02452 AC104794.3-201ENST00000566840 1248 ntBASIC19.73■□□□□ 0.75
COL1A1P02452 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL1A1P02452 AC106886.4-201ENST00000623557 2502 ntBASIC19.73■□□□□ 0.75
COL1A1P02452 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL1A1P02452 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL1A1P02452 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL1A1P02452 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL1A1P02452 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL1A1P02452 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL1A1P02452 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL1A1P02452 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL1A1P02452 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL1A1P02452 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL1A1P02452 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.73■□□□□ 0.75
COL1A1P02452 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
COL1A1P02452 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL1A1P02452 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL1A1P02452 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL1A1P02452 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL1A1P02452 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC19.73■□□□□ 0.75
COL1A1P02452 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC19.73■□□□□ 0.75
COL1A1P02452 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL1A1P02452 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC19.73■□□□□ 0.75
COL1A1P02452 API5-211ENST00000534695 560 ntTSL 5 BASIC19.73■□□□□ 0.75
COL1A1P02452 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL1A1P02452 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL1A1P02452 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL1A1P02452 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.72■□□□□ 0.75
COL1A1P02452 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.72■□□□□ 0.75
COL1A1P02452 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC19.72■□□□□ 0.75
COL1A1P02452 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL1A1P02452 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL1A1P02452 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC19.72■□□□□ 0.75
COL1A1P02452 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL1A1P02452 AC005052.1-201ENST00000625181 2492 ntBASIC19.72■□□□□ 0.75
COL1A1P02452 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.72■□□□□ 0.75
COL1A1P02452 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC19.72■□□□□ 0.75
COL1A1P02452 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL1A1P02452 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
COL1A1P02452 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL1A1P02452 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
COL1A1P02452 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL1A1P02452 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL1A1P02452 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
COL1A1P02452 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL1A1P02452 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL1A1P02452 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL1A1P02452 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC19.72■□□□□ 0.75
COL1A1P02452 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC19.72■□□□□ 0.75
COL1A1P02452 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC19.72■□□□□ 0.75
COL1A1P02452 RNA5-8SN1-201ENST00000610460 153 ntBASIC19.72■□□□□ 0.75
COL1A1P02452 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC19.72■□□□□ 0.75
COL1A1P02452 RNA5-8SN5-202ENST00000612463 153 ntBASIC19.72■□□□□ 0.75
COL1A1P02452 RNA5-8SN4-201ENST00000613359 153 ntBASIC19.72■□□□□ 0.75
COL1A1P02452 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL1A1P02452 RNA5-8SN5-201ENST00000619471 153 ntBASIC19.72■□□□□ 0.75
COL1A1P02452 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC19.72■□□□□ 0.75
COL1A1P02452 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms