Protein–RNA interactions for Protein: O95977

S1PR4, Sphingosine 1-phosphate receptor 4, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR4O95977 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.48■□□□□ 0.23
S1PR4O95977 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
S1PR4O95977 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
S1PR4O95977 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.48■□□□□ 0.23
S1PR4O95977 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
S1PR4O95977 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
S1PR4O95977 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
S1PR4O95977 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.47■□□□□ 0.23
S1PR4O95977 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
S1PR4O95977 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
S1PR4O95977 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
S1PR4O95977 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
S1PR4O95977 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
S1PR4O95977 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
S1PR4O95977 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
S1PR4O95977 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
S1PR4O95977 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.47■□□□□ 0.23
S1PR4O95977 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
S1PR4O95977 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.47■□□□□ 0.23
S1PR4O95977 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
S1PR4O95977 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
S1PR4O95977 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
S1PR4O95977 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.47■□□□□ 0.23
S1PR4O95977 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.47■□□□□ 0.23
S1PR4O95977 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
S1PR4O95977 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.47■□□□□ 0.23
S1PR4O95977 AL591424.1-201ENST00000442569 1213 ntBASIC16.47■□□□□ 0.23
S1PR4O95977 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
S1PR4O95977 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.47■□□□□ 0.23
S1PR4O95977 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.47■□□□□ 0.23
S1PR4O95977 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
S1PR4O95977 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.47■□□□□ 0.23
S1PR4O95977 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.47■□□□□ 0.23
S1PR4O95977 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.47■□□□□ 0.23
S1PR4O95977 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.47■□□□□ 0.23
S1PR4O95977 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
S1PR4O95977 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
S1PR4O95977 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
S1PR4O95977 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
S1PR4O95977 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
S1PR4O95977 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
S1PR4O95977 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.46■□□□□ 0.23
S1PR4O95977 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.46■□□□□ 0.23
S1PR4O95977 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
S1PR4O95977 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
S1PR4O95977 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.46■□□□□ 0.23
S1PR4O95977 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
S1PR4O95977 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
S1PR4O95977 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
S1PR4O95977 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
S1PR4O95977 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
S1PR4O95977 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
S1PR4O95977 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.46■□□□□ 0.23
S1PR4O95977 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.46■□□□□ 0.23
S1PR4O95977 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.46■□□□□ 0.23
S1PR4O95977 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
S1PR4O95977 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.46■□□□□ 0.23
S1PR4O95977 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
S1PR4O95977 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
S1PR4O95977 AC006449.6-201ENST00000612330 2296 ntBASIC16.46■□□□□ 0.23
S1PR4O95977 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
S1PR4O95977 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
S1PR4O95977 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
S1PR4O95977 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
S1PR4O95977 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.46■□□□□ 0.23
S1PR4O95977 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.46■□□□□ 0.23
S1PR4O95977 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
S1PR4O95977 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
S1PR4O95977 PMS2P4-201ENST00000412466 1052 ntBASIC16.46■□□□□ 0.23
S1PR4O95977 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.46■□□□□ 0.23
S1PR4O95977 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.46■□□□□ 0.23
S1PR4O95977 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.46■□□□□ 0.23
S1PR4O95977 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.46■□□□□ 0.23
S1PR4O95977 MIR3909-201ENST00000579518 119 ntBASIC16.46■□□□□ 0.23
S1PR4O95977 AL031055.1-201ENST00000606362 631 ntBASIC16.46■□□□□ 0.23
S1PR4O95977 AC021097.1-201ENST00000607902 574 ntBASIC16.46■□□□□ 0.23
S1PR4O95977 AC027601.4-201ENST00000611259 610 ntBASIC16.46■□□□□ 0.23
S1PR4O95977 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
S1PR4O95977 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
S1PR4O95977 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.46■□□□□ 0.23
S1PR4O95977 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.46■□□□□ 0.23
S1PR4O95977 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
S1PR4O95977 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.46■□□□□ 0.23
S1PR4O95977 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.46■□□□□ 0.23
S1PR4O95977 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
S1PR4O95977 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
S1PR4O95977 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
S1PR4O95977 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.46■□□□□ 0.23
S1PR4O95977 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
S1PR4O95977 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
S1PR4O95977 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
S1PR4O95977 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
S1PR4O95977 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
S1PR4O95977 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
S1PR4O95977 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.46■□□□□ 0.22
S1PR4O95977 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
S1PR4O95977 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.22
S1PR4O95977 REXO1L8P-201ENST00000604378 1897 ntBASIC16.46■□□□□ 0.22
S1PR4O95977 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
S1PR4O95977 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms