Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.56■□□□□ 0.56
GGPS1O95749 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GGPS1O95749 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.56■□□□□ 0.56
GGPS1O95749 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.56■□□□□ 0.56
GGPS1O95749 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
GGPS1O95749 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.56■□□□□ 0.56
GGPS1O95749 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
GGPS1O95749 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.56■□□□□ 0.56
GGPS1O95749 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.56■□□□□ 0.56
GGPS1O95749 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC18.56■□□□□ 0.56
GGPS1O95749 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.56■□□□□ 0.56
GGPS1O95749 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.56■□□□□ 0.56
GGPS1O95749 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
GGPS1O95749 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
GGPS1O95749 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GGPS1O95749 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
GGPS1O95749 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
GGPS1O95749 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
GGPS1O95749 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
GGPS1O95749 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.56■□□□□ 0.56
GGPS1O95749 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.56■□□□□ 0.56
GGPS1O95749 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.56■□□□□ 0.56
GGPS1O95749 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
GGPS1O95749 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
GGPS1O95749 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GGPS1O95749 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.55■□□□□ 0.56
GGPS1O95749 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GGPS1O95749 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
GGPS1O95749 NKILA-202ENST00000614771 2598 ntBASIC18.55■□□□□ 0.56
GGPS1O95749 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GGPS1O95749 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
GGPS1O95749 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
GGPS1O95749 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC18.55■□□□□ 0.56
GGPS1O95749 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.55■□□□□ 0.56
GGPS1O95749 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.55■□□□□ 0.56
GGPS1O95749 AL512652.2-201ENST00000625156 1716 ntBASIC18.55■□□□□ 0.56
GGPS1O95749 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.55■□□□□ 0.56
GGPS1O95749 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
GGPS1O95749 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
GGPS1O95749 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
GGPS1O95749 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.55■□□□□ 0.56
GGPS1O95749 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GGPS1O95749 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GGPS1O95749 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
GGPS1O95749 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.55■□□□□ 0.56
GGPS1O95749 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.55■□□□□ 0.56
GGPS1O95749 TSPY16P-201ENST00000449843 468 ntBASIC18.55■□□□□ 0.56
GGPS1O95749 AL512638.1-201ENST00000457493 794 ntBASIC18.55■□□□□ 0.56
GGPS1O95749 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
GGPS1O95749 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.55■□□□□ 0.56
GGPS1O95749 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.55■□□□□ 0.56
GGPS1O95749 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GGPS1O95749 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18.55■□□□□ 0.56
GGPS1O95749 AC007967.4-201ENST00000614700 386 ntBASIC18.55■□□□□ 0.56
GGPS1O95749 AC073592.8-201ENST00000624126 511 ntBASIC18.55■□□□□ 0.56
GGPS1O95749 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
GGPS1O95749 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
GGPS1O95749 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
GGPS1O95749 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
GGPS1O95749 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
GGPS1O95749 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
GGPS1O95749 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GGPS1O95749 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GGPS1O95749 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
GGPS1O95749 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
GGPS1O95749 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GGPS1O95749 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
GGPS1O95749 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GGPS1O95749 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
GGPS1O95749 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GGPS1O95749 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GGPS1O95749 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
GGPS1O95749 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.54■□□□□ 0.56
GGPS1O95749 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GGPS1O95749 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.54■□□□□ 0.56
GGPS1O95749 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GGPS1O95749 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GGPS1O95749 FAM220BP-201ENST00000377689 816 ntBASIC18.54■□□□□ 0.56
GGPS1O95749 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.54■□□□□ 0.56
GGPS1O95749 MIR661-201ENST00000384842 89 ntBASIC18.54■□□□□ 0.56
GGPS1O95749 AC236430.1-201ENST00000402231 743 ntBASIC18.54■□□□□ 0.56
GGPS1O95749 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
GGPS1O95749 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC18.54■□□□□ 0.56
GGPS1O95749 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.54■□□□□ 0.56
GGPS1O95749 COX20P2-201ENST00000452636 358 ntBASIC18.54■□□□□ 0.56
GGPS1O95749 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.54■□□□□ 0.56
GGPS1O95749 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.54■□□□□ 0.56
GGPS1O95749 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
GGPS1O95749 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GGPS1O95749 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.54■□□□□ 0.56
GGPS1O95749 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.54■□□□□ 0.56
GGPS1O95749 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
GGPS1O95749 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
GGPS1O95749 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
GGPS1O95749 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GGPS1O95749 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GGPS1O95749 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
GGPS1O95749 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
GGPS1O95749 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
GGPS1O95749 AC084018.2-201ENST00000613093 2607 ntBASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms