Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CNOT4O95628 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CNOT4O95628 AC124067.4-201ENST00000519691 2379 ntBASIC14.77□□□□□ -0.04
CNOT4O95628 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CNOT4O95628 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CNOT4O95628 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CNOT4O95628 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.77□□□□□ -0.04
CNOT4O95628 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CNOT4O95628 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CNOT4O95628 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CNOT4O95628 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CNOT4O95628 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CNOT4O95628 AC068587.6-202ENST00000641839 5619 ntBASIC14.77□□□□□ -0.04
CNOT4O95628 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CNOT4O95628 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CNOT4O95628 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CNOT4O95628 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
CNOT4O95628 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CNOT4O95628 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.77□□□□□ -0.04
CNOT4O95628 AKAP8P1-201ENST00000434743 1349 ntBASIC14.77□□□□□ -0.04
CNOT4O95628 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CNOT4O95628 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.77□□□□□ -0.04
CNOT4O95628 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CNOT4O95628 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CNOT4O95628 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CNOT4O95628 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.77□□□□□ -0.05
CNOT4O95628 AC092474.2-201ENST00000424288 719 ntBASIC14.77□□□□□ -0.05
CNOT4O95628 FAM8A3P-201ENST00000427218 844 ntBASIC14.77□□□□□ -0.05
CNOT4O95628 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
CNOT4O95628 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
CNOT4O95628 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CNOT4O95628 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.77□□□□□ -0.05
CNOT4O95628 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.77□□□□□ -0.05
CNOT4O95628 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.77□□□□□ -0.05
CNOT4O95628 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.77□□□□□ -0.05
CNOT4O95628 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.77□□□□□ -0.05
CNOT4O95628 AL078644.1-201ENST00000609881 752 ntBASIC14.77□□□□□ -0.05
CNOT4O95628 AC092902.6-201ENST00000641783 218 ntBASIC14.77□□□□□ -0.05
CNOT4O95628 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CNOT4O95628 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CNOT4O95628 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CNOT4O95628 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CNOT4O95628 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
CNOT4O95628 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
CNOT4O95628 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.77□□□□□ -0.05
CNOT4O95628 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CNOT4O95628 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CNOT4O95628 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CNOT4O95628 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CNOT4O95628 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.76□□□□□ -0.05
CNOT4O95628 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.76□□□□□ -0.05
CNOT4O95628 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CNOT4O95628 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CNOT4O95628 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CNOT4O95628 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CNOT4O95628 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CNOT4O95628 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CNOT4O95628 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.76□□□□□ -0.05
CNOT4O95628 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CNOT4O95628 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CNOT4O95628 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CNOT4O95628 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CNOT4O95628 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CNOT4O95628 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.76□□□□□ -0.05
CNOT4O95628 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CNOT4O95628 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CNOT4O95628 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.76□□□□□ -0.05
CNOT4O95628 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.76□□□□□ -0.05
CNOT4O95628 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.76□□□□□ -0.05
CNOT4O95628 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CNOT4O95628 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.76□□□□□ -0.05
CNOT4O95628 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CNOT4O95628 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CNOT4O95628 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CNOT4O95628 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CNOT4O95628 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.76□□□□□ -0.05
CNOT4O95628 RN7SL589P-201ENST00000481268 310 ntBASIC14.76□□□□□ -0.05
CNOT4O95628 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.76□□□□□ -0.05
CNOT4O95628 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CNOT4O95628 AC011467.4-201ENST00000594891 528 ntBASIC14.76□□□□□ -0.05
CNOT4O95628 AL031055.1-201ENST00000606362 631 ntBASIC14.76□□□□□ -0.05
CNOT4O95628 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
CNOT4O95628 AC106028.4-201ENST00000614509 607 ntBASIC14.76□□□□□ -0.05
CNOT4O95628 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CNOT4O95628 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.76□□□□□ -0.05
CNOT4O95628 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
CNOT4O95628 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CNOT4O95628 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.76□□□□□ -0.05
CNOT4O95628 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC14.76□□□□□ -0.05
CNOT4O95628 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CNOT4O95628 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CNOT4O95628 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.76□□□□□ -0.05
CNOT4O95628 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
CNOT4O95628 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CNOT4O95628 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
CNOT4O95628 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC14.76□□□□□ -0.05
CNOT4O95628 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC14.76□□□□□ -0.05
CNOT4O95628 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CNOT4O95628 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CNOT4O95628 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms