Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SIX3O95343 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.25■□□□□ 0.19
SIX3O95343 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SIX3O95343 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.25■□□□□ 0.19
SIX3O95343 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SIX3O95343 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIX3O95343 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SIX3O95343 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.25■□□□□ 0.19
SIX3O95343 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIX3O95343 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SIX3O95343 AC024909.3-201ENST00000611513 2257 ntBASIC16.25■□□□□ 0.19
SIX3O95343 AC006449.6-201ENST00000612330 2296 ntBASIC16.25■□□□□ 0.19
SIX3O95343 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SIX3O95343 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIX3O95343 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.25■□□□□ 0.19
SIX3O95343 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.25■□□□□ 0.19
SIX3O95343 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SIX3O95343 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.25■□□□□ 0.19
SIX3O95343 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SIX3O95343 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SIX3O95343 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SIX3O95343 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.24■□□□□ 0.19
SIX3O95343 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SIX3O95343 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SIX3O95343 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SIX3O95343 AC129492.6-201ENST00000611383 1305 ntBASIC16.24■□□□□ 0.19
SIX3O95343 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SIX3O95343 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SIX3O95343 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.24■□□□□ 0.19
SIX3O95343 AC010491.1-201ENST00000563101 2797 ntBASIC16.24■□□□□ 0.19
SIX3O95343 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.24■□□□□ 0.19
SIX3O95343 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SIX3O95343 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SIX3O95343 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SIX3O95343 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SIX3O95343 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.24■□□□□ 0.19
SIX3O95343 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SIX3O95343 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SIX3O95343 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
SIX3O95343 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.24■□□□□ 0.19
SIX3O95343 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.24■□□□□ 0.19
SIX3O95343 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
SIX3O95343 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
SIX3O95343 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.24■□□□□ 0.19
SIX3O95343 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.24■□□□□ 0.19
SIX3O95343 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.24■□□□□ 0.19
SIX3O95343 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.24■□□□□ 0.19
SIX3O95343 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SIX3O95343 AC105339.3-201ENST00000560043 636 ntBASIC16.24■□□□□ 0.19
SIX3O95343 AC005412.3-201ENST00000580309 715 ntBASIC16.24■□□□□ 0.19
SIX3O95343 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SIX3O95343 AL121912.1-201ENST00000603683 238 ntBASIC16.24■□□□□ 0.19
SIX3O95343 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.24■□□□□ 0.19
SIX3O95343 MIR1199-201ENST00000621445 119 ntBASIC16.24■□□□□ 0.19
SIX3O95343 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SIX3O95343 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.24■□□□□ 0.19
SIX3O95343 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.24■□□□□ 0.19
SIX3O95343 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
SIX3O95343 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
SIX3O95343 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SIX3O95343 REXO1L8P-201ENST00000604378 1897 ntBASIC16.24■□□□□ 0.19
SIX3O95343 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SIX3O95343 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
SIX3O95343 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.24■□□□□ 0.19
SIX3O95343 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.24■□□□□ 0.19
SIX3O95343 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
SIX3O95343 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SIX3O95343 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SIX3O95343 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SIX3O95343 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SIX3O95343 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SIX3O95343 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.23■□□□□ 0.19
SIX3O95343 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.23■□□□□ 0.19
SIX3O95343 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SIX3O95343 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SIX3O95343 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.23■□□□□ 0.19
SIX3O95343 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SIX3O95343 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SIX3O95343 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SIX3O95343 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.23■□□□□ 0.19
SIX3O95343 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SIX3O95343 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SIX3O95343 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SIX3O95343 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SIX3O95343 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SIX3O95343 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SIX3O95343 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.23■□□□□ 0.19
SIX3O95343 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.23■□□□□ 0.19
SIX3O95343 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.23■□□□□ 0.19
SIX3O95343 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.23■□□□□ 0.19
SIX3O95343 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.23■□□□□ 0.19
SIX3O95343 OR7E47P-204ENST00000575924 449 ntBASIC16.23■□□□□ 0.19
SIX3O95343 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.23■□□□□ 0.19
SIX3O95343 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SIX3O95343 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SIX3O95343 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SIX3O95343 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.23■□□□□ 0.19
SIX3O95343 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SIX3O95343 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SIX3O95343 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms