Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NKX2-2O95096 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.28■□□□□ 0.04
NKX2-2O95096 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
NKX2-2O95096 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.28■□□□□ 0.04
NKX2-2O95096 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NKX2-2O95096 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NKX2-2O95096 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NKX2-2O95096 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NKX2-2O95096 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.28■□□□□ 0.04
NKX2-2O95096 PCDH8P1-201ENST00000428983 2773 ntBASIC15.28■□□□□ 0.04
NKX2-2O95096 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.28■□□□□ 0.04
NKX2-2O95096 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
NKX2-2O95096 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.28■□□□□ 0.04
NKX2-2O95096 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NKX2-2O95096 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NKX2-2O95096 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NKX2-2O95096 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.28■□□□□ 0.04
NKX2-2O95096 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.28■□□□□ 0.04
NKX2-2O95096 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
NKX2-2O95096 PGAM5P1-201ENST00000518923 814 ntBASIC15.28■□□□□ 0.04
NKX2-2O95096 AC112191.1-201ENST00000523689 701 ntBASIC15.28■□□□□ 0.04
NKX2-2O95096 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
NKX2-2O95096 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.28■□□□□ 0.04
NKX2-2O95096 AC040169.1-201ENST00000565382 521 ntBASIC15.28■□□□□ 0.04
NKX2-2O95096 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NKX2-2O95096 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NKX2-2O95096 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
NKX2-2O95096 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NKX2-2O95096 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NKX2-2O95096 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NKX2-2O95096 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NKX2-2O95096 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.28■□□□□ 0.04
NKX2-2O95096 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NKX2-2O95096 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NKX2-2O95096 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NKX2-2O95096 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NKX2-2O95096 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.28■□□□□ 0.04
NKX2-2O95096 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NKX2-2O95096 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NKX2-2O95096 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NKX2-2O95096 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NKX2-2O95096 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
NKX2-2O95096 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NKX2-2O95096 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.28■□□□□ 0.04
NKX2-2O95096 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NKX2-2O95096 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NKX2-2O95096 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NKX2-2O95096 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NKX2-2O95096 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
NKX2-2O95096 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NKX2-2O95096 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
NKX2-2O95096 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NKX2-2O95096 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NKX2-2O95096 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
NKX2-2O95096 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.27■□□□□ 0.04
NKX2-2O95096 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NKX2-2O95096 WASH6P-202ENST00000359512 1437 ntBASIC15.27■□□□□ 0.04
NKX2-2O95096 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.04
NKX2-2O95096 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NKX2-2O95096 REXO1L8P-201ENST00000604378 1897 ntBASIC15.27■□□□□ 0.04
NKX2-2O95096 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NKX2-2O95096 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
NKX2-2O95096 AC006449.6-201ENST00000612330 2296 ntBASIC15.27■□□□□ 0.04
NKX2-2O95096 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.27■□□□□ 0.04
NKX2-2O95096 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.27■□□□□ 0.04
NKX2-2O95096 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
NKX2-2O95096 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
NKX2-2O95096 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
NKX2-2O95096 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.27■□□□□ 0.04
NKX2-2O95096 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
NKX2-2O95096 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.27■□□□□ 0.04
NKX2-2O95096 AC023274.1-201ENST00000418278 595 ntBASIC15.27■□□□□ 0.04
NKX2-2O95096 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.27■□□□□ 0.04
NKX2-2O95096 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
NKX2-2O95096 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.27■□□□□ 0.04
NKX2-2O95096 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NKX2-2O95096 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
NKX2-2O95096 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NKX2-2O95096 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NKX2-2O95096 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NKX2-2O95096 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.27■□□□□ 0.04
NKX2-2O95096 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.27■□□□□ 0.04
NKX2-2O95096 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.27■□□□□ 0.03
NKX2-2O95096 AC026691.1-201ENST00000602502 2017 ntBASIC15.27■□□□□ 0.03
NKX2-2O95096 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NKX2-2O95096 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NKX2-2O95096 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
NKX2-2O95096 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NKX2-2O95096 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.27■□□□□ 0.03
NKX2-2O95096 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.27■□□□□ 0.03
NKX2-2O95096 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
NKX2-2O95096 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NKX2-2O95096 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NKX2-2O95096 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NKX2-2O95096 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
NKX2-2O95096 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
NKX2-2O95096 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NKX2-2O95096 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
NKX2-2O95096 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NKX2-2O95096 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms