Protein–RNA interactions for Protein: O75473

LGR5, Leucine-rich repeat-containing G-protein coupled receptor 5, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5O75473 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LGR5O75473 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.34■□□□□ 0.53
LGR5O75473 AC073592.8-201ENST00000624126 511 ntBASIC18.34■□□□□ 0.53
LGR5O75473 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.34■□□□□ 0.53
LGR5O75473 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LGR5O75473 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LGR5O75473 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LGR5O75473 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.34■□□□□ 0.53
LGR5O75473 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LGR5O75473 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LGR5O75473 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
LGR5O75473 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
LGR5O75473 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.34■□□□□ 0.53
LGR5O75473 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
LGR5O75473 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.33■□□□□ 0.53
LGR5O75473 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LGR5O75473 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LGR5O75473 AL035456.1-201ENST00000456064 1369 ntBASIC18.33■□□□□ 0.53
LGR5O75473 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
LGR5O75473 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LGR5O75473 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
LGR5O75473 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.33■□□□□ 0.53
LGR5O75473 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
LGR5O75473 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LGR5O75473 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
LGR5O75473 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.33■□□□□ 0.52
LGR5O75473 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LGR5O75473 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.33■□□□□ 0.52
LGR5O75473 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.33■□□□□ 0.52
LGR5O75473 GAPDHP21-201ENST00000450301 1010 ntBASIC18.33■□□□□ 0.52
LGR5O75473 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.33■□□□□ 0.52
LGR5O75473 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.33■□□□□ 0.52
LGR5O75473 SPDYE12P-201ENST00000618416 771 ntBASIC18.33■□□□□ 0.52
LGR5O75473 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LGR5O75473 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.33■□□□□ 0.52
LGR5O75473 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.33■□□□□ 0.52
LGR5O75473 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
LGR5O75473 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
LGR5O75473 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
LGR5O75473 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.33■□□□□ 0.52
LGR5O75473 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LGR5O75473 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.33■□□□□ 0.52
LGR5O75473 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LGR5O75473 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
LGR5O75473 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LGR5O75473 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LGR5O75473 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LGR5O75473 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LGR5O75473 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
LGR5O75473 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.32■□□□□ 0.52
LGR5O75473 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
LGR5O75473 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.32■□□□□ 0.52
LGR5O75473 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
LGR5O75473 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
LGR5O75473 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LGR5O75473 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LGR5O75473 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
LGR5O75473 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.32■□□□□ 0.52
LGR5O75473 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LGR5O75473 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LGR5O75473 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
LGR5O75473 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LGR5O75473 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.32■□□□□ 0.52
LGR5O75473 TSSK5P-201ENST00000423978 907 ntBASIC18.32■□□□□ 0.52
LGR5O75473 AL353705.2-201ENST00000428243 662 ntBASIC18.32■□□□□ 0.52
LGR5O75473 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LGR5O75473 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.32■□□□□ 0.52
LGR5O75473 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LGR5O75473 AC004890.2-204ENST00000481968 304 ntBASIC18.32■□□□□ 0.52
LGR5O75473 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC18.32■□□□□ 0.52
LGR5O75473 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
LGR5O75473 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
LGR5O75473 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LGR5O75473 CECR7-204ENST00000609932 568 ntTSL 2 BASIC18.32■□□□□ 0.52
LGR5O75473 AL138828.2-201ENST00000615812 383 ntBASIC18.32■□□□□ 0.52
LGR5O75473 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LGR5O75473 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LGR5O75473 AL589702.1-201ENST00000641229 1509 ntBASIC18.32■□□□□ 0.52
LGR5O75473 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LGR5O75473 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
LGR5O75473 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LGR5O75473 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LGR5O75473 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LGR5O75473 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.31■□□□□ 0.52
LGR5O75473 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LGR5O75473 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LGR5O75473 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
LGR5O75473 GK-202ENST00000378941 458 ntTSL 3 BASIC18.31■□□□□ 0.52
LGR5O75473 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LGR5O75473 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.31■□□□□ 0.52
LGR5O75473 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.31■□□□□ 0.52
LGR5O75473 CRB3P1-201ENST00000449338 276 ntBASIC18.31■□□□□ 0.52
LGR5O75473 HLA-V-204ENST00000476601 1289 ntBASIC18.31■□□□□ 0.52
LGR5O75473 RNA5SP410-201ENST00000516285 106 ntBASIC18.31■□□□□ 0.52
LGR5O75473 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.31■□□□□ 0.52
LGR5O75473 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LGR5O75473 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.31■□□□□ 0.52
LGR5O75473 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.31■□□□□ 0.52
LGR5O75473 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
LGR5O75473 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms