Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBFD1O14562 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBFD1O14562 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UBFD1O14562 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
UBFD1O14562 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.11■□□□□ 0.17
UBFD1O14562 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBFD1O14562 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBFD1O14562 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.11■□□□□ 0.17
UBFD1O14562 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.11■□□□□ 0.17
UBFD1O14562 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.11■□□□□ 0.17
UBFD1O14562 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
UBFD1O14562 AC112504.1-201ENST00000623415 1841 ntBASIC16.11■□□□□ 0.17
UBFD1O14562 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBFD1O14562 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.11■□□□□ 0.17
UBFD1O14562 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.11■□□□□ 0.17
UBFD1O14562 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.11■□□□□ 0.17
UBFD1O14562 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.11■□□□□ 0.17
UBFD1O14562 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.11■□□□□ 0.17
UBFD1O14562 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.11■□□□□ 0.17
UBFD1O14562 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBFD1O14562 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.11■□□□□ 0.17
UBFD1O14562 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
UBFD1O14562 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.11■□□□□ 0.17
UBFD1O14562 AC008667.4-201ENST00000607370 168 ntBASIC16.11■□□□□ 0.17
UBFD1O14562 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.11■□□□□ 0.17
UBFD1O14562 GGTLC5P-201ENST00000617623 998 ntBASIC16.11■□□□□ 0.17
UBFD1O14562 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBFD1O14562 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBFD1O14562 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.11■□□□□ 0.17
UBFD1O14562 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UBFD1O14562 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
UBFD1O14562 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBFD1O14562 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.11■□□□□ 0.17
UBFD1O14562 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.11■□□□□ 0.17
UBFD1O14562 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
UBFD1O14562 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBFD1O14562 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBFD1O14562 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
UBFD1O14562 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBFD1O14562 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBFD1O14562 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBFD1O14562 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
UBFD1O14562 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
UBFD1O14562 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
UBFD1O14562 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
UBFD1O14562 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBFD1O14562 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBFD1O14562 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
UBFD1O14562 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.1■□□□□ 0.17
UBFD1O14562 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
UBFD1O14562 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBFD1O14562 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
UBFD1O14562 HCG4-201ENST00000418983 998 ntBASIC16.1■□□□□ 0.17
UBFD1O14562 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.1■□□□□ 0.17
UBFD1O14562 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.1■□□□□ 0.17
UBFD1O14562 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.1■□□□□ 0.17
UBFD1O14562 AC136632.2-201ENST00000512891 861 ntBASIC16.1■□□□□ 0.17
UBFD1O14562 OR7E14P-202ENST00000530490 1290 ntBASIC16.1■□□□□ 0.17
UBFD1O14562 OR7E47P-204ENST00000575924 449 ntBASIC16.1■□□□□ 0.17
UBFD1O14562 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
UBFD1O14562 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.1■□□□□ 0.17
UBFD1O14562 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.1■□□□□ 0.17
UBFD1O14562 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
UBFD1O14562 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBFD1O14562 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.1■□□□□ 0.17
UBFD1O14562 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBFD1O14562 CDC14C-201ENST00000428251 1719 ntBASIC16.1■□□□□ 0.17
UBFD1O14562 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBFD1O14562 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBFD1O14562 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBFD1O14562 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.1■□□□□ 0.17
UBFD1O14562 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
UBFD1O14562 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.1■□□□□ 0.17
UBFD1O14562 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
UBFD1O14562 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.09■□□□□ 0.17
UBFD1O14562 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBFD1O14562 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
UBFD1O14562 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBFD1O14562 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBFD1O14562 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBFD1O14562 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.09■□□□□ 0.17
UBFD1O14562 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.09■□□□□ 0.17
UBFD1O14562 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UBFD1O14562 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBFD1O14562 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
UBFD1O14562 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UBFD1O14562 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBFD1O14562 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UBFD1O14562 HNRNPDP1-201ENST00000439535 754 ntBASIC16.09■□□□□ 0.17
UBFD1O14562 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.09■□□□□ 0.17
UBFD1O14562 UNC93B7-201ENST00000509439 705 ntBASIC16.09■□□□□ 0.17
UBFD1O14562 IGHV3-65-201ENST00000523210 341 ntBASIC16.09■□□□□ 0.17
UBFD1O14562 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.09■□□□□ 0.17
UBFD1O14562 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.09■□□□□ 0.17
UBFD1O14562 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
UBFD1O14562 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.09■□□□□ 0.17
UBFD1O14562 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.09■□□□□ 0.17
UBFD1O14562 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UBFD1O14562 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
UBFD1O14562 AP001350.2-201ENST00000625104 1094 ntBASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms