Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.26■□□□□ 0.35
YJEFN3A6XGL0 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.26■□□□□ 0.35
YJEFN3A6XGL0 KRT8P23-201ENST00000560090 1207 ntBASIC17.26■□□□□ 0.35
YJEFN3A6XGL0 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.26■□□□□ 0.35
YJEFN3A6XGL0 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.26■□□□□ 0.35
YJEFN3A6XGL0 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
YJEFN3A6XGL0 AC084121.4-201ENST00000641598 221 ntBASIC17.26■□□□□ 0.35
YJEFN3A6XGL0 AF228730.8-201ENST00000642140 221 ntBASIC17.26■□□□□ 0.35
YJEFN3A6XGL0 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
YJEFN3A6XGL0 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
YJEFN3A6XGL0 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
YJEFN3A6XGL0 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.26■□□□□ 0.35
YJEFN3A6XGL0 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
YJEFN3A6XGL0 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.26■□□□□ 0.35
YJEFN3A6XGL0 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
YJEFN3A6XGL0 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
YJEFN3A6XGL0 FOXO1B-201ENST00000504678 1527 ntBASIC17.26■□□□□ 0.35
YJEFN3A6XGL0 UXT-AS1-201ENST00000590504 1525 ntBASIC17.26■□□□□ 0.35
YJEFN3A6XGL0 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
YJEFN3A6XGL0 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
YJEFN3A6XGL0 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
YJEFN3A6XGL0 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
YJEFN3A6XGL0 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
YJEFN3A6XGL0 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.25■□□□□ 0.35
YJEFN3A6XGL0 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
YJEFN3A6XGL0 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
YJEFN3A6XGL0 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.25■□□□□ 0.35
YJEFN3A6XGL0 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
YJEFN3A6XGL0 LINC01144-201ENST00000626198 1710 ntBASIC17.25■□□□□ 0.35
YJEFN3A6XGL0 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.25■□□□□ 0.35
YJEFN3A6XGL0 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
YJEFN3A6XGL0 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
YJEFN3A6XGL0 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
YJEFN3A6XGL0 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
YJEFN3A6XGL0 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.25■□□□□ 0.35
YJEFN3A6XGL0 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.25■□□□□ 0.35
YJEFN3A6XGL0 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
YJEFN3A6XGL0 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.25■□□□□ 0.35
YJEFN3A6XGL0 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.25■□□□□ 0.35
YJEFN3A6XGL0 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.25■□□□□ 0.35
YJEFN3A6XGL0 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.25■□□□□ 0.35
YJEFN3A6XGL0 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
YJEFN3A6XGL0 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.25■□□□□ 0.35
YJEFN3A6XGL0 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
YJEFN3A6XGL0 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
YJEFN3A6XGL0 AC092183.1-201ENST00000469884 875 ntBASIC17.25■□□□□ 0.35
YJEFN3A6XGL0 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.25■□□□□ 0.35
YJEFN3A6XGL0 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.25■□□□□ 0.35
YJEFN3A6XGL0 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.25■□□□□ 0.35
YJEFN3A6XGL0 AC073389.1-201ENST00000595595 795 ntBASIC17.25■□□□□ 0.35
YJEFN3A6XGL0 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
YJEFN3A6XGL0 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
YJEFN3A6XGL0 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
YJEFN3A6XGL0 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
YJEFN3A6XGL0 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
YJEFN3A6XGL0 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
YJEFN3A6XGL0 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
YJEFN3A6XGL0 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
YJEFN3A6XGL0 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.25■□□□□ 0.35
YJEFN3A6XGL0 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
YJEFN3A6XGL0 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
YJEFN3A6XGL0 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
YJEFN3A6XGL0 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
YJEFN3A6XGL0 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
YJEFN3A6XGL0 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.24■□□□□ 0.35
YJEFN3A6XGL0 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.24■□□□□ 0.35
YJEFN3A6XGL0 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
YJEFN3A6XGL0 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.24■□□□□ 0.35
YJEFN3A6XGL0 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
YJEFN3A6XGL0 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
YJEFN3A6XGL0 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
YJEFN3A6XGL0 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.24■□□□□ 0.35
YJEFN3A6XGL0 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
YJEFN3A6XGL0 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.24■□□□□ 0.35
YJEFN3A6XGL0 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
YJEFN3A6XGL0 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
YJEFN3A6XGL0 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
YJEFN3A6XGL0 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.24■□□□□ 0.35
YJEFN3A6XGL0 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.24■□□□□ 0.35
YJEFN3A6XGL0 AC142381.1-201ENST00000426099 345 ntBASIC17.24■□□□□ 0.35
YJEFN3A6XGL0 AC093724.1-201ENST00000448659 1027 ntBASIC17.24■□□□□ 0.35
YJEFN3A6XGL0 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.24■□□□□ 0.35
YJEFN3A6XGL0 AC023141.5-201ENST00000458585 616 ntBASIC17.24■□□□□ 0.35
YJEFN3A6XGL0 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.24■□□□□ 0.35
YJEFN3A6XGL0 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
YJEFN3A6XGL0 AC105233.2-201ENST00000523697 349 ntBASIC17.24■□□□□ 0.35
YJEFN3A6XGL0 AF228730.5-201ENST00000530288 346 ntBASIC17.24■□□□□ 0.35
YJEFN3A6XGL0 SLC25A39P2-201ENST00000537614 270 ntBASIC17.24■□□□□ 0.35
YJEFN3A6XGL0 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
YJEFN3A6XGL0 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
YJEFN3A6XGL0 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.24■□□□□ 0.35
YJEFN3A6XGL0 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
YJEFN3A6XGL0 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.24■□□□□ 0.35
YJEFN3A6XGL0 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
YJEFN3A6XGL0 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.24■□□□□ 0.35
YJEFN3A6XGL0 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
YJEFN3A6XGL0 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
YJEFN3A6XGL0 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
YJEFN3A6XGL0 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
YJEFN3A6XGL0 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms