Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
TMEM88BA6NKF7 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
TMEM88BA6NKF7 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM88BA6NKF7 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC18.99■□□□□ 0.63
TMEM88BA6NKF7 AC093525.9-201ENST00000624961 1746 ntBASIC18.99■□□□□ 0.63
TMEM88BA6NKF7 Z97205.2-201ENST00000564697 1639 ntBASIC18.99■□□□□ 0.63
TMEM88BA6NKF7 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
TMEM88BA6NKF7 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
TMEM88BA6NKF7 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.99■□□□□ 0.63
TMEM88BA6NKF7 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM88BA6NKF7 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM88BA6NKF7 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
TMEM88BA6NKF7 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM88BA6NKF7 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TMEM88BA6NKF7 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TMEM88BA6NKF7 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM88BA6NKF7 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.98■□□□□ 0.63
TMEM88BA6NKF7 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM88BA6NKF7 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.98■□□□□ 0.63
TMEM88BA6NKF7 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM88BA6NKF7 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.98■□□□□ 0.63
TMEM88BA6NKF7 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM88BA6NKF7 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC18.98■□□□□ 0.63
TMEM88BA6NKF7 PFN2-215ENST00000497148 743 ntTSL 4 BASIC18.98■□□□□ 0.63
TMEM88BA6NKF7 HIST2H2BC-201ENST00000498492 580 ntBASIC18.98■□□□□ 0.63
TMEM88BA6NKF7 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM88BA6NKF7 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC18.98■□□□□ 0.63
TMEM88BA6NKF7 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC18.98■□□□□ 0.63
TMEM88BA6NKF7 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC18.98■□□□□ 0.63
TMEM88BA6NKF7 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC18.98■□□□□ 0.63
TMEM88BA6NKF7 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TMEM88BA6NKF7 MIR3619-201ENST00000579667 83 ntBASIC18.98■□□□□ 0.63
TMEM88BA6NKF7 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC18.98■□□□□ 0.63
TMEM88BA6NKF7 LINC01115-203ENST00000606068 577 ntBASIC18.98■□□□□ 0.63
TMEM88BA6NKF7 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM88BA6NKF7 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM88BA6NKF7 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.98■□□□□ 0.63
TMEM88BA6NKF7 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM88BA6NKF7 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.98■□□□□ 0.63
TMEM88BA6NKF7 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM88BA6NKF7 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC18.98■□□□□ 0.63
TMEM88BA6NKF7 AC092978.1-202ENST00000637590 1327 ntBASIC18.98■□□□□ 0.63
TMEM88BA6NKF7 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM88BA6NKF7 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TMEM88BA6NKF7 AC138028.4-201ENST00000564984 1845 ntBASIC18.97■□□□□ 0.63
TMEM88BA6NKF7 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
TMEM88BA6NKF7 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
TMEM88BA6NKF7 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
TMEM88BA6NKF7 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TMEM88BA6NKF7 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.97■□□□□ 0.63
TMEM88BA6NKF7 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
TMEM88BA6NKF7 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TMEM88BA6NKF7 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
TMEM88BA6NKF7 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC18.97■□□□□ 0.63
TMEM88BA6NKF7 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
TMEM88BA6NKF7 CHMP4BP1-201ENST00000556017 588 ntBASIC18.97■□□□□ 0.63
TMEM88BA6NKF7 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC18.97■□□□□ 0.63
TMEM88BA6NKF7 CLUHP6-201ENST00000580789 941 ntBASIC18.97■□□□□ 0.63
TMEM88BA6NKF7 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
TMEM88BA6NKF7 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
TMEM88BA6NKF7 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TMEM88BA6NKF7 AC138627.1-207ENST00000641560 1006 ntBASIC18.97■□□□□ 0.63
TMEM88BA6NKF7 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
TMEM88BA6NKF7 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TMEM88BA6NKF7 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TMEM88BA6NKF7 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
TMEM88BA6NKF7 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TMEM88BA6NKF7 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
TMEM88BA6NKF7 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC18.97■□□□□ 0.63
TMEM88BA6NKF7 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.97■□□□□ 0.63
TMEM88BA6NKF7 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.97■□□□□ 0.63
TMEM88BA6NKF7 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM88BA6NKF7 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM88BA6NKF7 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM88BA6NKF7 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
TMEM88BA6NKF7 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM88BA6NKF7 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM88BA6NKF7 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
TMEM88BA6NKF7 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM88BA6NKF7 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM88BA6NKF7 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM88BA6NKF7 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
TMEM88BA6NKF7 MIR33B-201ENST00000385104 96 ntBASIC18.96■□□□□ 0.63
TMEM88BA6NKF7 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM88BA6NKF7 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC18.96■□□□□ 0.63
TMEM88BA6NKF7 C2orf27AP3-201ENST00000434123 579 ntBASIC18.96■□□□□ 0.63
TMEM88BA6NKF7 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC18.96■□□□□ 0.63
TMEM88BA6NKF7 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC18.96■□□□□ 0.63
TMEM88BA6NKF7 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC18.96■□□□□ 0.63
TMEM88BA6NKF7 AP006547.1-201ENST00000563435 692 ntBASIC18.96■□□□□ 0.63
TMEM88BA6NKF7 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC18.96■□□□□ 0.63
TMEM88BA6NKF7 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC18.96■□□□□ 0.63
TMEM88BA6NKF7 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC18.96■□□□□ 0.63
TMEM88BA6NKF7 AC005695.3-201ENST00000614522 232 ntBASIC18.96■□□□□ 0.63
TMEM88BA6NKF7 LARP4-220ENST00000615080 856 ntTSL 5 BASIC18.96■□□□□ 0.63
TMEM88BA6NKF7 AL354718.3-201ENST00000616414 581 ntBASIC18.96■□□□□ 0.63
TMEM88BA6NKF7 CR382287.1-201ENST00000623954 586 ntBASIC18.96■□□□□ 0.63
TMEM88BA6NKF7 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM88BA6NKF7 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM88BA6NKF7 INTS4P2-202ENST00000614726 2019 ntBASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms