Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
TCRBV4S1A1TA0A5B7 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
TCRBV4S1A1TA0A5B7 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
TCRBV4S1A1TA0A5B7 AL391005.1-201ENST00000623953 2435 ntBASIC13.39□□□□□ -0.27
TCRBV4S1A1TA0A5B7 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TCRBV4S1A1TA0A5B7 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TCRBV4S1A1TA0A5B7 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13.39□□□□□ -0.27
TCRBV4S1A1TA0A5B7 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC13.39□□□□□ -0.27
TCRBV4S1A1TA0A5B7 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC13.39□□□□□ -0.27
TCRBV4S1A1TA0A5B7 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC13.39□□□□□ -0.27
TCRBV4S1A1TA0A5B7 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TCRBV4S1A1TA0A5B7 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
TCRBV4S1A1TA0A5B7 AC007064.4-201ENST00000637740 555 ntBASIC13.39□□□□□ -0.27
TCRBV4S1A1TA0A5B7 AC134684.3-201ENST00000641758 218 ntBASIC13.39□□□□□ -0.27
TCRBV4S1A1TA0A5B7 AC092865.6-201ENST00000642101 219 ntBASIC13.39□□□□□ -0.27
TCRBV4S1A1TA0A5B7 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TCRBV4S1A1TA0A5B7 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC13.39□□□□□ -0.27
TCRBV4S1A1TA0A5B7 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TCRBV4S1A1TA0A5B7 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC13.39□□□□□ -0.27
TCRBV4S1A1TA0A5B7 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC13.39□□□□□ -0.27
TCRBV4S1A1TA0A5B7 ACE-204ENST00000428043 5120 ntTSL 2 BASIC13.39□□□□□ -0.27
TCRBV4S1A1TA0A5B7 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC13.39□□□□□ -0.27
TCRBV4S1A1TA0A5B7 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TCRBV4S1A1TA0A5B7 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
TCRBV4S1A1TA0A5B7 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TCRBV4S1A1TA0A5B7 PCDHB17P-201ENST00000539533 2393 ntBASIC13.39□□□□□ -0.27
TCRBV4S1A1TA0A5B7 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC13.39□□□□□ -0.27
TCRBV4S1A1TA0A5B7 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC13.39□□□□□ -0.27
TCRBV4S1A1TA0A5B7 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TCRBV4S1A1TA0A5B7 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TCRBV4S1A1TA0A5B7 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC13.39□□□□□ -0.27
TCRBV4S1A1TA0A5B7 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TCRBV4S1A1TA0A5B7 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TCRBV4S1A1TA0A5B7 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
TCRBV4S1A1TA0A5B7 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
TCRBV4S1A1TA0A5B7 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TCRBV4S1A1TA0A5B7 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC13.39□□□□□ -0.27
TCRBV4S1A1TA0A5B7 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TCRBV4S1A1TA0A5B7 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TCRBV4S1A1TA0A5B7 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TCRBV4S1A1TA0A5B7 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TCRBV4S1A1TA0A5B7 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC13.39□□□□□ -0.27
TCRBV4S1A1TA0A5B7 AL590787.1-201ENST00000568856 1315 ntBASIC13.39□□□□□ -0.27
TCRBV4S1A1TA0A5B7 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC13.38□□□□□ -0.27
TCRBV4S1A1TA0A5B7 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TCRBV4S1A1TA0A5B7 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TCRBV4S1A1TA0A5B7 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TCRBV4S1A1TA0A5B7 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC13.38□□□□□ -0.27
TCRBV4S1A1TA0A5B7 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TCRBV4S1A1TA0A5B7 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TCRBV4S1A1TA0A5B7 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TCRBV4S1A1TA0A5B7 HLA-A-202ENST00000376806 1854 ntBASIC13.38□□□□□ -0.27
TCRBV4S1A1TA0A5B7 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC13.38□□□□□ -0.27
TCRBV4S1A1TA0A5B7 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TCRBV4S1A1TA0A5B7 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TCRBV4S1A1TA0A5B7 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TCRBV4S1A1TA0A5B7 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
TCRBV4S1A1TA0A5B7 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC13.38□□□□□ -0.27
TCRBV4S1A1TA0A5B7 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TCRBV4S1A1TA0A5B7 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TCRBV4S1A1TA0A5B7 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TCRBV4S1A1TA0A5B7 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC13.38□□□□□ -0.27
TCRBV4S1A1TA0A5B7 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC13.38□□□□□ -0.27
TCRBV4S1A1TA0A5B7 RIN3-211ENST00000557762 517 ntTSL 3 BASIC13.38□□□□□ -0.27
TCRBV4S1A1TA0A5B7 AC096734.2-201ENST00000562054 433 ntBASIC13.38□□□□□ -0.27
TCRBV4S1A1TA0A5B7 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC13.38□□□□□ -0.27
TCRBV4S1A1TA0A5B7 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC13.38□□□□□ -0.27
TCRBV4S1A1TA0A5B7 AC004877.2-201ENST00000623941 599 ntBASIC13.38□□□□□ -0.27
TCRBV4S1A1TA0A5B7 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC13.38□□□□□ -0.27
TCRBV4S1A1TA0A5B7 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
TCRBV4S1A1TA0A5B7 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TCRBV4S1A1TA0A5B7 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TCRBV4S1A1TA0A5B7 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TCRBV4S1A1TA0A5B7 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TCRBV4S1A1TA0A5B7 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TCRBV4S1A1TA0A5B7 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TCRBV4S1A1TA0A5B7 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TCRBV4S1A1TA0A5B7 GCK-209ENST00000616242 2260 ntTSL 5 BASIC13.38□□□□□ -0.27
TCRBV4S1A1TA0A5B7 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC13.38□□□□□ -0.27
TCRBV4S1A1TA0A5B7 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TCRBV4S1A1TA0A5B7 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TCRBV4S1A1TA0A5B7 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
TCRBV4S1A1TA0A5B7 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
TCRBV4S1A1TA0A5B7 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TCRBV4S1A1TA0A5B7 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC13.38□□□□□ -0.27
TCRBV4S1A1TA0A5B7 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TCRBV4S1A1TA0A5B7 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TCRBV4S1A1TA0A5B7 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC13.38□□□□□ -0.27
TCRBV4S1A1TA0A5B7 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TCRBV4S1A1TA0A5B7 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC13.37□□□□□ -0.27
TCRBV4S1A1TA0A5B7 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TCRBV4S1A1TA0A5B7 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC13.37□□□□□ -0.27
TCRBV4S1A1TA0A5B7 AC079328.2-201ENST00000561241 3354 ntBASIC13.37□□□□□ -0.27
TCRBV4S1A1TA0A5B7 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TCRBV4S1A1TA0A5B7 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TCRBV4S1A1TA0A5B7 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TCRBV4S1A1TA0A5B7 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC13.37□□□□□ -0.27
TCRBV4S1A1TA0A5B7 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TCRBV4S1A1TA0A5B7 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TCRBV4S1A1TA0A5B7 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms