Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC22.53■■□□□ 1.2
NINLQ9Y2I6 AL590560.3-201ENST00000623350 461 ntBASIC22.53■■□□□ 1.2
NINLQ9Y2I6 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC22.53■■□□□ 1.2
NINLQ9Y2I6 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
NINLQ9Y2I6 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC22.53■■□□□ 1.2
NINLQ9Y2I6 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NINLQ9Y2I6 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
NINLQ9Y2I6 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NINLQ9Y2I6 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NINLQ9Y2I6 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC22.53■■□□□ 1.2
NINLQ9Y2I6 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
NINLQ9Y2I6 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC22.53■■□□□ 1.2
NINLQ9Y2I6 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NINLQ9Y2I6 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC22.53■■□□□ 1.2
NINLQ9Y2I6 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC22.53■■□□□ 1.2
NINLQ9Y2I6 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC22.53■■□□□ 1.2
NINLQ9Y2I6 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NINLQ9Y2I6 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
NINLQ9Y2I6 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
NINLQ9Y2I6 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC22.52■■□□□ 1.2
NINLQ9Y2I6 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NINLQ9Y2I6 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
NINLQ9Y2I6 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC22.52■■□□□ 1.2
NINLQ9Y2I6 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC22.52■■□□□ 1.2
NINLQ9Y2I6 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC22.52■■□□□ 1.2
NINLQ9Y2I6 RN7SL828P-201ENST00000607615 303 ntBASIC22.52■■□□□ 1.2
NINLQ9Y2I6 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
NINLQ9Y2I6 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
NINLQ9Y2I6 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.2
NINLQ9Y2I6 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC22.52■■□□□ 1.2
NINLQ9Y2I6 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NINLQ9Y2I6 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NINLQ9Y2I6 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC22.52■■□□□ 1.2
NINLQ9Y2I6 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC22.52■■□□□ 1.2
NINLQ9Y2I6 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC22.52■■□□□ 1.2
NINLQ9Y2I6 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC22.52■■□□□ 1.2
NINLQ9Y2I6 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC22.52■■□□□ 1.2
NINLQ9Y2I6 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC22.52■■□□□ 1.2
NINLQ9Y2I6 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
NINLQ9Y2I6 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC22.52■■□□□ 1.2
NINLQ9Y2I6 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NINLQ9Y2I6 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC22.51■■□□□ 1.19
NINLQ9Y2I6 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
NINLQ9Y2I6 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
NINLQ9Y2I6 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC22.51■■□□□ 1.19
NINLQ9Y2I6 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
NINLQ9Y2I6 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
NINLQ9Y2I6 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
NINLQ9Y2I6 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
NINLQ9Y2I6 NAA50-208ENST00000497255 789 ntTSL 5 BASIC22.51■■□□□ 1.19
NINLQ9Y2I6 AC027369.6-201ENST00000525520 931 ntBASIC22.51■■□□□ 1.19
NINLQ9Y2I6 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC22.51■■□□□ 1.19
NINLQ9Y2I6 COQ6-210ENST00000554920 649 ntTSL 3 BASIC22.51■■□□□ 1.19
NINLQ9Y2I6 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
NINLQ9Y2I6 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC22.51■■□□□ 1.19
NINLQ9Y2I6 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
NINLQ9Y2I6 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
NINLQ9Y2I6 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
NINLQ9Y2I6 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
NINLQ9Y2I6 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
NINLQ9Y2I6 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
NINLQ9Y2I6 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
NINLQ9Y2I6 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC22.51■■□□□ 1.19
NINLQ9Y2I6 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC22.51■■□□□ 1.19
NINLQ9Y2I6 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
NINLQ9Y2I6 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
NINLQ9Y2I6 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
NINLQ9Y2I6 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
NINLQ9Y2I6 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
NINLQ9Y2I6 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NINLQ9Y2I6 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC22.5■■□□□ 1.19
NINLQ9Y2I6 ATP5G2P4-201ENST00000442175 420 ntBASIC22.5■■□□□ 1.19
NINLQ9Y2I6 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC22.5■■□□□ 1.19
NINLQ9Y2I6 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
NINLQ9Y2I6 AL844908.2-201ENST00000609461 460 ntBASIC22.5■■□□□ 1.19
NINLQ9Y2I6 AC008761.3-201ENST00000624803 892 ntBASIC22.5■■□□□ 1.19
NINLQ9Y2I6 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC22.5■■□□□ 1.19
NINLQ9Y2I6 AC080080.1-201ENST00000625121 2420 ntBASIC22.5■■□□□ 1.19
NINLQ9Y2I6 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC22.5■■□□□ 1.19
NINLQ9Y2I6 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
NINLQ9Y2I6 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
NINLQ9Y2I6 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
NINLQ9Y2I6 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC22.5■■□□□ 1.19
NINLQ9Y2I6 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC22.5■■□□□ 1.19
NINLQ9Y2I6 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
NINLQ9Y2I6 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
NINLQ9Y2I6 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
NINLQ9Y2I6 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC22.5■■□□□ 1.19
NINLQ9Y2I6 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NINLQ9Y2I6 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
NINLQ9Y2I6 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
NINLQ9Y2I6 AC022144.1-201ENST00000602255 1580 ntBASIC22.5■■□□□ 1.19
NINLQ9Y2I6 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
NINLQ9Y2I6 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
NINLQ9Y2I6 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
NINLQ9Y2I6 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC22.5■■□□□ 1.19
NINLQ9Y2I6 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC22.5■■□□□ 1.19
NINLQ9Y2I6 RBM39-205ENST00000397370 612 ntTSL 2 BASIC22.5■■□□□ 1.19
NINLQ9Y2I6 RAC2-204ENST00000406508 893 ntTSL 5 BASIC22.5■■□□□ 1.19
NINLQ9Y2I6 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms