Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 REXO1L2P-201ENST00000425429 2069 ntBASIC13.51□□□□□ -0.25
NKX6-2Q9C056 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
NKX6-2Q9C056 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
NKX6-2Q9C056 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NKX6-2Q9C056 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
NKX6-2Q9C056 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NKX6-2Q9C056 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NKX6-2Q9C056 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
NKX6-2Q9C056 AL135905.2-201ENST00000584934 1404 ntBASIC13.51□□□□□ -0.25
NKX6-2Q9C056 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC13.51□□□□□ -0.25
NKX6-2Q9C056 SLC25A1P3-201ENST00000395415 828 ntBASIC13.51□□□□□ -0.25
NKX6-2Q9C056 KRT18P29-201ENST00000397031 1267 ntBASIC13.51□□□□□ -0.25
NKX6-2Q9C056 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC13.51□□□□□ -0.25
NKX6-2Q9C056 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NKX6-2Q9C056 KRT18P65-201ENST00000439811 1286 ntBASIC13.51□□□□□ -0.25
NKX6-2Q9C056 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
NKX6-2Q9C056 AC116562.2-201ENST00000507042 360 ntBASIC13.51□□□□□ -0.25
NKX6-2Q9C056 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC13.51□□□□□ -0.25
NKX6-2Q9C056 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC13.51□□□□□ -0.25
NKX6-2Q9C056 GXYLT1P5-201ENST00000614548 1189 ntBASIC13.51□□□□□ -0.25
NKX6-2Q9C056 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NKX6-2Q9C056 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NKX6-2Q9C056 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NKX6-2Q9C056 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
NKX6-2Q9C056 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NKX6-2Q9C056 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NKX6-2Q9C056 ST20-AS1-201ENST00000560255 4223 ntBASIC13.51□□□□□ -0.25
NKX6-2Q9C056 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NKX6-2Q9C056 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NKX6-2Q9C056 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NKX6-2Q9C056 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.51□□□□□ -0.25
NKX6-2Q9C056 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NKX6-2Q9C056 AC232323.1-201ENST00000540724 2099 ntBASIC13.51□□□□□ -0.25
NKX6-2Q9C056 REXO1L5P-201ENST00000622260 2098 ntBASIC13.51□□□□□ -0.25
NKX6-2Q9C056 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.51□□□□□ -0.25
NKX6-2Q9C056 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.51□□□□□ -0.25
NKX6-2Q9C056 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC13.51□□□□□ -0.25
NKX6-2Q9C056 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NKX6-2Q9C056 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.51□□□□□ -0.25
NKX6-2Q9C056 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NKX6-2Q9C056 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
NKX6-2Q9C056 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NKX6-2Q9C056 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
NKX6-2Q9C056 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NKX6-2Q9C056 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NKX6-2Q9C056 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
NKX6-2Q9C056 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NKX6-2Q9C056 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.5□□□□□ -0.25
NKX6-2Q9C056 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
NKX6-2Q9C056 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC13.5□□□□□ -0.25
NKX6-2Q9C056 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NKX6-2Q9C056 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
NKX6-2Q9C056 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
NKX6-2Q9C056 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
NKX6-2Q9C056 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.5□□□□□ -0.25
NKX6-2Q9C056 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NKX6-2Q9C056 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
NKX6-2Q9C056 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NKX6-2Q9C056 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NKX6-2Q9C056 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
NKX6-2Q9C056 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NKX6-2Q9C056 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NKX6-2Q9C056 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NKX6-2Q9C056 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NKX6-2Q9C056 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
NKX6-2Q9C056 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NKX6-2Q9C056 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NKX6-2Q9C056 SLC25A1P2-201ENST00000430693 912 ntBASIC13.5□□□□□ -0.25
NKX6-2Q9C056 RNA5SP413-201ENST00000516373 109 ntBASIC13.5□□□□□ -0.25
NKX6-2Q9C056 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NKX6-2Q9C056 AL109954.1-202ENST00000564051 2148 ntBASIC13.5□□□□□ -0.25
NKX6-2Q9C056 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC13.5□□□□□ -0.25
NKX6-2Q9C056 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC13.5□□□□□ -0.25
NKX6-2Q9C056 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NKX6-2Q9C056 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NKX6-2Q9C056 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC13.5□□□□□ -0.25
NKX6-2Q9C056 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NKX6-2Q9C056 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
NKX6-2Q9C056 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
NKX6-2Q9C056 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.5□□□□□ -0.25
NKX6-2Q9C056 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.5□□□□□ -0.25
NKX6-2Q9C056 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
NKX6-2Q9C056 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
NKX6-2Q9C056 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.5□□□□□ -0.25
NKX6-2Q9C056 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.5□□□□□ -0.25
NKX6-2Q9C056 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
NKX6-2Q9C056 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NKX6-2Q9C056 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
NKX6-2Q9C056 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC13.5□□□□□ -0.25
NKX6-2Q9C056 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC13.5□□□□□ -0.25
NKX6-2Q9C056 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
NKX6-2Q9C056 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NKX6-2Q9C056 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NKX6-2Q9C056 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
NKX6-2Q9C056 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NKX6-2Q9C056 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NKX6-2Q9C056 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
NKX6-2Q9C056 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NKX6-2Q9C056 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NKX6-2Q9C056 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms