Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.88□□□□□ -0.19
SSBP3Q9BWW4 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.88□□□□□ -0.19
SSBP3Q9BWW4 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP3Q9BWW4 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP3Q9BWW4 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP3Q9BWW4 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
SSBP3Q9BWW4 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
SSBP3Q9BWW4 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
SSBP3Q9BWW4 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC13.88□□□□□ -0.19
SSBP3Q9BWW4 OVCH1-AS1-204ENST00000641955 5529 ntBASIC13.88□□□□□ -0.19
SSBP3Q9BWW4 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP3Q9BWW4 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP3Q9BWW4 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP3Q9BWW4 STOM-202ENST00000347359 870 ntTSL 2 BASIC13.88□□□□□ -0.19
SSBP3Q9BWW4 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP3Q9BWW4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP3Q9BWW4 TFAMP1-201ENST00000412727 736 ntBASIC13.88□□□□□ -0.19
SSBP3Q9BWW4 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC13.88□□□□□ -0.19
SSBP3Q9BWW4 ADH5P3-201ENST00000433842 1137 ntBASIC13.88□□□□□ -0.19
SSBP3Q9BWW4 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP3Q9BWW4 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC13.88□□□□□ -0.19
SSBP3Q9BWW4 MIR4492-201ENST00000581627 80 ntBASIC13.88□□□□□ -0.19
SSBP3Q9BWW4 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
SSBP3Q9BWW4 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
SSBP3Q9BWW4 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP3Q9BWW4 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP3Q9BWW4 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP3Q9BWW4 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
SSBP3Q9BWW4 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC13.88□□□□□ -0.19
SSBP3Q9BWW4 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
SSBP3Q9BWW4 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP3Q9BWW4 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
SSBP3Q9BWW4 SLC9A3P2-201ENST00000447821 2021 ntBASIC13.88□□□□□ -0.19
SSBP3Q9BWW4 ACE-204ENST00000428043 5120 ntTSL 2 BASIC13.88□□□□□ -0.19
SSBP3Q9BWW4 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP3Q9BWW4 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP3Q9BWW4 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.88□□□□□ -0.19
SSBP3Q9BWW4 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP3Q9BWW4 AKAP8P1-201ENST00000434743 1349 ntBASIC13.88□□□□□ -0.19
SSBP3Q9BWW4 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
SSBP3Q9BWW4 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP3Q9BWW4 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP3Q9BWW4 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP3Q9BWW4 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP3Q9BWW4 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP3Q9BWW4 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP3Q9BWW4 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SSBP3Q9BWW4 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC13.87□□□□□ -0.19
SSBP3Q9BWW4 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SSBP3Q9BWW4 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SSBP3Q9BWW4 AL118508.1-201ENST00000613502 2345 ntBASIC13.87□□□□□ -0.19
SSBP3Q9BWW4 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
SSBP3Q9BWW4 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SSBP3Q9BWW4 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SSBP3Q9BWW4 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SSBP3Q9BWW4 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SSBP3Q9BWW4 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SSBP3Q9BWW4 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC13.87□□□□□ -0.19
SSBP3Q9BWW4 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SSBP3Q9BWW4 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SSBP3Q9BWW4 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SSBP3Q9BWW4 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SSBP3Q9BWW4 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC13.87□□□□□ -0.19
SSBP3Q9BWW4 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SSBP3Q9BWW4 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC13.87□□□□□ -0.19
SSBP3Q9BWW4 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SSBP3Q9BWW4 AC092474.2-201ENST00000424288 719 ntBASIC13.87□□□□□ -0.19
SSBP3Q9BWW4 WDR53-204ENST00000433160 887 ntTSL 5 BASIC13.87□□□□□ -0.19
SSBP3Q9BWW4 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.87□□□□□ -0.19
SSBP3Q9BWW4 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SSBP3Q9BWW4 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC13.87□□□□□ -0.19
SSBP3Q9BWW4 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.87□□□□□ -0.19
SSBP3Q9BWW4 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC13.87□□□□□ -0.19
SSBP3Q9BWW4 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SSBP3Q9BWW4 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC13.87□□□□□ -0.19
SSBP3Q9BWW4 AL135744.1-201ENST00000565098 629 ntBASIC13.87□□□□□ -0.19
SSBP3Q9BWW4 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC13.87□□□□□ -0.19
SSBP3Q9BWW4 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.87□□□□□ -0.19
SSBP3Q9BWW4 AC022145.2-201ENST00000598203 171 ntBASIC13.87□□□□□ -0.19
SSBP3Q9BWW4 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC13.87□□□□□ -0.19
SSBP3Q9BWW4 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.87□□□□□ -0.19
SSBP3Q9BWW4 AC021097.1-201ENST00000607902 574 ntBASIC13.87□□□□□ -0.19
SSBP3Q9BWW4 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
SSBP3Q9BWW4 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SSBP3Q9BWW4 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SSBP3Q9BWW4 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SSBP3Q9BWW4 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SSBP3Q9BWW4 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC13.87□□□□□ -0.19
SSBP3Q9BWW4 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SSBP3Q9BWW4 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SSBP3Q9BWW4 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC13.87□□□□□ -0.19
SSBP3Q9BWW4 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SSBP3Q9BWW4 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SSBP3Q9BWW4 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SSBP3Q9BWW4 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SSBP3Q9BWW4 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SSBP3Q9BWW4 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC13.87□□□□□ -0.19
SSBP3Q9BWW4 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC13.87□□□□□ -0.19
SSBP3Q9BWW4 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SSBP3Q9BWW4 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms