Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RPAP1Q9BWH6 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
RPAP1Q9BWH6 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RPAP1Q9BWH6 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC20.1■□□□□ 0.81
RPAP1Q9BWH6 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RPAP1Q9BWH6 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RPAP1Q9BWH6 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC20.09■□□□□ 0.81
RPAP1Q9BWH6 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RPAP1Q9BWH6 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
RPAP1Q9BWH6 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RPAP1Q9BWH6 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RPAP1Q9BWH6 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
RPAP1Q9BWH6 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RPAP1Q9BWH6 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RPAP1Q9BWH6 VMA21-202ENST00000370361 693 ntTSL 5 BASIC20.09■□□□□ 0.81
RPAP1Q9BWH6 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RPAP1Q9BWH6 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC20.09■□□□□ 0.81
RPAP1Q9BWH6 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RPAP1Q9BWH6 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC20.09■□□□□ 0.81
RPAP1Q9BWH6 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC20.09■□□□□ 0.81
RPAP1Q9BWH6 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC20.09■□□□□ 0.81
RPAP1Q9BWH6 MTRF1LP2-201ENST00000506027 1122 ntBASIC20.09■□□□□ 0.81
RPAP1Q9BWH6 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC20.09■□□□□ 0.81
RPAP1Q9BWH6 RNA5SP421-201ENST00000516864 134 ntBASIC20.09■□□□□ 0.81
RPAP1Q9BWH6 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC20.09■□□□□ 0.81
RPAP1Q9BWH6 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC20.09■□□□□ 0.81
RPAP1Q9BWH6 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RPAP1Q9BWH6 PRR29-209ENST00000582540 967 ntTSL 2 BASIC20.09■□□□□ 0.81
RPAP1Q9BWH6 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RPAP1Q9BWH6 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC20.09■□□□□ 0.81
RPAP1Q9BWH6 AL139011.1-202ENST00000642063 584 ntBASIC20.09■□□□□ 0.81
RPAP1Q9BWH6 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
RPAP1Q9BWH6 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC20.09■□□□□ 0.81
RPAP1Q9BWH6 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RPAP1Q9BWH6 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC20.09■□□□□ 0.81
RPAP1Q9BWH6 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RPAP1Q9BWH6 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RPAP1Q9BWH6 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC20.09■□□□□ 0.81
RPAP1Q9BWH6 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RPAP1Q9BWH6 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RPAP1Q9BWH6 SNX33P1-201ENST00000592116 1762 ntBASIC20.09■□□□□ 0.81
RPAP1Q9BWH6 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
RPAP1Q9BWH6 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC20.09■□□□□ 0.81
RPAP1Q9BWH6 AC006277.1-201ENST00000624348 1610 ntBASIC20.09■□□□□ 0.81
RPAP1Q9BWH6 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
RPAP1Q9BWH6 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
RPAP1Q9BWH6 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC20.09■□□□□ 0.81
RPAP1Q9BWH6 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC20.09■□□□□ 0.81
RPAP1Q9BWH6 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RPAP1Q9BWH6 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RPAP1Q9BWH6 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RPAP1Q9BWH6 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RPAP1Q9BWH6 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
RPAP1Q9BWH6 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RPAP1Q9BWH6 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC20.08■□□□□ 0.81
RPAP1Q9BWH6 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC20.08■□□□□ 0.81
RPAP1Q9BWH6 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RPAP1Q9BWH6 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
RPAP1Q9BWH6 WRB-204ENST00000398753 699 ntTSL 3 BASIC20.08■□□□□ 0.81
RPAP1Q9BWH6 AC092474.2-201ENST00000424288 719 ntBASIC20.08■□□□□ 0.81
RPAP1Q9BWH6 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC20.08■□□□□ 0.81
RPAP1Q9BWH6 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RPAP1Q9BWH6 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC20.08■□□□□ 0.81
RPAP1Q9BWH6 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RPAP1Q9BWH6 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RPAP1Q9BWH6 WT1-AS_2.1-201ENST00000613208 137 ntBASIC20.08■□□□□ 0.81
RPAP1Q9BWH6 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC20.08■□□□□ 0.81
RPAP1Q9BWH6 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RPAP1Q9BWH6 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
RPAP1Q9BWH6 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RPAP1Q9BWH6 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RPAP1Q9BWH6 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RPAP1Q9BWH6 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
RPAP1Q9BWH6 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RPAP1Q9BWH6 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RPAP1Q9BWH6 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.08■□□□□ 0.8
RPAP1Q9BWH6 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC20.08■□□□□ 0.8
RPAP1Q9BWH6 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.8
RPAP1Q9BWH6 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.8
RPAP1Q9BWH6 WASH6P-202ENST00000359512 1437 ntBASIC20.08■□□□□ 0.8
RPAP1Q9BWH6 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RPAP1Q9BWH6 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC20.08■□□□□ 0.8
RPAP1Q9BWH6 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC20.08■□□□□ 0.8
RPAP1Q9BWH6 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
RPAP1Q9BWH6 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC20.08■□□□□ 0.8
RPAP1Q9BWH6 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
RPAP1Q9BWH6 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
RPAP1Q9BWH6 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RPAP1Q9BWH6 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
RPAP1Q9BWH6 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RPAP1Q9BWH6 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC20.08■□□□□ 0.8
RPAP1Q9BWH6 RNU1-129P-201ENST00000384064 167 ntBASIC20.08■□□□□ 0.8
RPAP1Q9BWH6 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC20.08■□□□□ 0.8
RPAP1Q9BWH6 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC20.08■□□□□ 0.8
RPAP1Q9BWH6 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.8
RPAP1Q9BWH6 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC20.08■□□□□ 0.8
RPAP1Q9BWH6 U1.21-201ENST00000580816 167 ntBASIC20.08■□□□□ 0.8
RPAP1Q9BWH6 CYP2A7P1-201ENST00000595391 815 ntBASIC20.08■□□□□ 0.8
RPAP1Q9BWH6 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RPAP1Q9BWH6 RAB34-224ENST00000636513 888 ntTSL 5 BASIC20.08■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms