Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 PRYP6-201ENST00000514804 343 ntBASIC17.28■□□□□ 0.36
TRIM62Q9BVG3 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.28■□□□□ 0.36
TRIM62Q9BVG3 IGHV3-62-201ENST00000520057 340 ntBASIC17.28■□□□□ 0.36
TRIM62Q9BVG3 AC105233.2-201ENST00000523697 349 ntBASIC17.28■□□□□ 0.36
TRIM62Q9BVG3 AF228730.5-201ENST00000530288 346 ntBASIC17.28■□□□□ 0.36
TRIM62Q9BVG3 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM62Q9BVG3 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.28■□□□□ 0.36
TRIM62Q9BVG3 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM62Q9BVG3 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.28■□□□□ 0.36
TRIM62Q9BVG3 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.28■□□□□ 0.36
TRIM62Q9BVG3 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM62Q9BVG3 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.28■□□□□ 0.36
TRIM62Q9BVG3 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.28■□□□□ 0.36
TRIM62Q9BVG3 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM62Q9BVG3 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
TRIM62Q9BVG3 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM62Q9BVG3 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.28■□□□□ 0.36
TRIM62Q9BVG3 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM62Q9BVG3 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM62Q9BVG3 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM62Q9BVG3 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.27■□□□□ 0.36
TRIM62Q9BVG3 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.27■□□□□ 0.36
TRIM62Q9BVG3 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.27■□□□□ 0.36
TRIM62Q9BVG3 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM62Q9BVG3 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM62Q9BVG3 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TRIM62Q9BVG3 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TRIM62Q9BVG3 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM62Q9BVG3 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TRIM62Q9BVG3 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.27■□□□□ 0.36
TRIM62Q9BVG3 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM62Q9BVG3 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.27■□□□□ 0.36
TRIM62Q9BVG3 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.27■□□□□ 0.36
TRIM62Q9BVG3 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.27■□□□□ 0.36
TRIM62Q9BVG3 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.27■□□□□ 0.36
TRIM62Q9BVG3 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.27■□□□□ 0.36
TRIM62Q9BVG3 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.27■□□□□ 0.36
TRIM62Q9BVG3 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM62Q9BVG3 AC004835.2-201ENST00000603762 682 ntBASIC17.27■□□□□ 0.36
TRIM62Q9BVG3 AL513210.1-201ENST00000629608 234 ntBASIC17.27■□□□□ 0.36
TRIM62Q9BVG3 AC105339.1-204ENST00000636249 355 ntBASIC17.27■□□□□ 0.36
TRIM62Q9BVG3 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.36
TRIM62Q9BVG3 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.27■□□□□ 0.36
TRIM62Q9BVG3 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM62Q9BVG3 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM62Q9BVG3 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM62Q9BVG3 AGGF1P2-201ENST00000426656 2106 ntBASIC17.27■□□□□ 0.35
TRIM62Q9BVG3 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
TRIM62Q9BVG3 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM62Q9BVG3 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.27■□□□□ 0.35
TRIM62Q9BVG3 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
TRIM62Q9BVG3 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM62Q9BVG3 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM62Q9BVG3 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.27■□□□□ 0.35
TRIM62Q9BVG3 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM62Q9BVG3 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM62Q9BVG3 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM62Q9BVG3 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
TRIM62Q9BVG3 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM62Q9BVG3 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM62Q9BVG3 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM62Q9BVG3 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM62Q9BVG3 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM62Q9BVG3 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM62Q9BVG3 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM62Q9BVG3 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TRIM62Q9BVG3 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TRIM62Q9BVG3 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM62Q9BVG3 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
TRIM62Q9BVG3 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TRIM62Q9BVG3 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TRIM62Q9BVG3 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TRIM62Q9BVG3 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM62Q9BVG3 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM62Q9BVG3 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM62Q9BVG3 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM62Q9BVG3 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TRIM62Q9BVG3 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM62Q9BVG3 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM62Q9BVG3 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.26■□□□□ 0.35
TRIM62Q9BVG3 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.26■□□□□ 0.35
TRIM62Q9BVG3 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.26■□□□□ 0.35
TRIM62Q9BVG3 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
TRIM62Q9BVG3 AC079140.1-201ENST00000508039 487 ntBASIC17.26■□□□□ 0.35
TRIM62Q9BVG3 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.26■□□□□ 0.35
TRIM62Q9BVG3 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.26■□□□□ 0.35
TRIM62Q9BVG3 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.26■□□□□ 0.35
TRIM62Q9BVG3 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM62Q9BVG3 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.26■□□□□ 0.35
TRIM62Q9BVG3 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM62Q9BVG3 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM62Q9BVG3 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM62Q9BVG3 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM62Q9BVG3 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM62Q9BVG3 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM62Q9BVG3 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.26■□□□□ 0.35
TRIM62Q9BVG3 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM62Q9BVG3 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM62Q9BVG3 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.26■□□□□ 0.35
TRIM62Q9BVG3 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms