Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.16■□□□□ 0.02
NPAS1Q99742 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.15■□□□□ 0.02
NPAS1Q99742 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
NPAS1Q99742 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.15■□□□□ 0.02
NPAS1Q99742 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.15■□□□□ 0.02
NPAS1Q99742 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NPAS1Q99742 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NPAS1Q99742 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPAS1Q99742 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPAS1Q99742 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPAS1Q99742 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
NPAS1Q99742 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
NPAS1Q99742 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.15■□□□□ 0.02
NPAS1Q99742 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPAS1Q99742 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPAS1Q99742 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPAS1Q99742 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPAS1Q99742 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.15■□□□□ 0.02
NPAS1Q99742 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.15■□□□□ 0.02
NPAS1Q99742 RNU1-129P-201ENST00000384064 167 ntBASIC15.15■□□□□ 0.02
NPAS1Q99742 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.15■□□□□ 0.02
NPAS1Q99742 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.15■□□□□ 0.02
NPAS1Q99742 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.15■□□□□ 0.02
NPAS1Q99742 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NPAS1Q99742 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
NPAS1Q99742 ALG1L5P-201ENST00000482043 771 ntBASIC15.15■□□□□ 0.02
NPAS1Q99742 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.15■□□□□ 0.02
NPAS1Q99742 AP002472.1-201ENST00000577490 586 ntBASIC15.15■□□□□ 0.02
NPAS1Q99742 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.15■□□□□ 0.02
NPAS1Q99742 U1.21-201ENST00000580816 167 ntBASIC15.15■□□□□ 0.02
NPAS1Q99742 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.15■□□□□ 0.02
NPAS1Q99742 AL645728.2-201ENST00000641974 660 ntBASIC15.15■□□□□ 0.02
NPAS1Q99742 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPAS1Q99742 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NPAS1Q99742 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
NPAS1Q99742 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NPAS1Q99742 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPAS1Q99742 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPAS1Q99742 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.15■□□□□ 0.02
NPAS1Q99742 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.15■□□□□ 0.02
NPAS1Q99742 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NPAS1Q99742 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPAS1Q99742 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.15■□□□□ 0.02
NPAS1Q99742 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
NPAS1Q99742 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
NPAS1Q99742 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NPAS1Q99742 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.15■□□□□ 0.02
NPAS1Q99742 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.14■□□□□ 0.01
NPAS1Q99742 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS1Q99742 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS1Q99742 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
NPAS1Q99742 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS1Q99742 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
NPAS1Q99742 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS1Q99742 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
NPAS1Q99742 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS1Q99742 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS1Q99742 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS1Q99742 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS1Q99742 ALOX12P2-203ENST00000570921 1945 ntBASIC15.14■□□□□ 0.01
NPAS1Q99742 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
NPAS1Q99742 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS1Q99742 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
NPAS1Q99742 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS1Q99742 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS1Q99742 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS1Q99742 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS1Q99742 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.14■□□□□ 0.01
NPAS1Q99742 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.14■□□□□ 0.01
NPAS1Q99742 AC004832.2-201ENST00000426397 482 ntBASIC15.14■□□□□ 0.01
NPAS1Q99742 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS1Q99742 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS1Q99742 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.14■□□□□ 0.01
NPAS1Q99742 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.14■□□□□ 0.01
NPAS1Q99742 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.14■□□□□ 0.01
NPAS1Q99742 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.14■□□□□ 0.01
NPAS1Q99742 AL078644.1-201ENST00000609881 752 ntBASIC15.14■□□□□ 0.01
NPAS1Q99742 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.14■□□□□ 0.01
NPAS1Q99742 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS1Q99742 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS1Q99742 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
NPAS1Q99742 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.14■□□□□ 0.01
NPAS1Q99742 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS1Q99742 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.14■□□□□ 0.01
NPAS1Q99742 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.14■□□□□ 0.01
NPAS1Q99742 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS1Q99742 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
NPAS1Q99742 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS1Q99742 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.14■□□□□ 0.01
NPAS1Q99742 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS1Q99742 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
NPAS1Q99742 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS1Q99742 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.13■□□□□ 0.01
NPAS1Q99742 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.13■□□□□ 0.01
NPAS1Q99742 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS1Q99742 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS1Q99742 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.13■□□□□ 0.01
NPAS1Q99742 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
NPAS1Q99742 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS1Q99742 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms