Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 AC093433.1-201ENST00000458048 571 ntBASIC17.07■□□□□ 0.32
CDX2Q99626 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC17.07■□□□□ 0.32
CDX2Q99626 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC17.07■□□□□ 0.32
CDX2Q99626 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC17.07■□□□□ 0.32
CDX2Q99626 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CDX2Q99626 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CDX2Q99626 NDUFV2P1-201ENST00000596415 907 ntBASIC17.07■□□□□ 0.32
CDX2Q99626 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.07■□□□□ 0.32
CDX2Q99626 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDX2Q99626 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDX2Q99626 AL671710.1-201ENST00000610245 2349 ntBASIC17.07■□□□□ 0.32
CDX2Q99626 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDX2Q99626 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.06■□□□□ 0.32
CDX2Q99626 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDX2Q99626 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.06■□□□□ 0.32
CDX2Q99626 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDX2Q99626 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CDX2Q99626 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CDX2Q99626 INTS4P2-202ENST00000614726 2019 ntBASIC17.06■□□□□ 0.32
CDX2Q99626 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.06■□□□□ 0.32
CDX2Q99626 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDX2Q99626 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDX2Q99626 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CDX2Q99626 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CDX2Q99626 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDX2Q99626 AC234644.1-201ENST00000406065 370 ntBASIC17.06■□□□□ 0.32
CDX2Q99626 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDX2Q99626 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC17.06■□□□□ 0.32
CDX2Q99626 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC17.06■□□□□ 0.32
CDX2Q99626 ATP6V0CP2-201ENST00000469409 207 ntBASIC17.06■□□□□ 0.32
CDX2Q99626 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC17.06■□□□□ 0.32
CDX2Q99626 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC17.06■□□□□ 0.32
CDX2Q99626 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CDX2Q99626 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC17.06■□□□□ 0.32
CDX2Q99626 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.06■□□□□ 0.32
CDX2Q99626 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.06■□□□□ 0.32
CDX2Q99626 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.06■□□□□ 0.32
CDX2Q99626 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.06■□□□□ 0.32
CDX2Q99626 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC17.06■□□□□ 0.32
CDX2Q99626 CU633904.3-201ENST00000624042 1029 ntBASIC17.06■□□□□ 0.32
CDX2Q99626 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
CDX2Q99626 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDX2Q99626 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDX2Q99626 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDX2Q99626 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDX2Q99626 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDX2Q99626 Z97205.2-201ENST00000564697 1639 ntBASIC17.06■□□□□ 0.32
CDX2Q99626 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDX2Q99626 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDX2Q99626 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDX2Q99626 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDX2Q99626 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDX2Q99626 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDX2Q99626 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CDX2Q99626 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.06■□□□□ 0.32
CDX2Q99626 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CDX2Q99626 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDX2Q99626 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDX2Q99626 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDX2Q99626 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDX2Q99626 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.05■□□□□ 0.32
CDX2Q99626 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDX2Q99626 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDX2Q99626 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDX2Q99626 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDX2Q99626 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDX2Q99626 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.05■□□□□ 0.32
CDX2Q99626 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.05■□□□□ 0.32
CDX2Q99626 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC17.05■□□□□ 0.32
CDX2Q99626 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.05■□□□□ 0.32
CDX2Q99626 RN7SL818P-201ENST00000485099 259 ntBASIC17.05■□□□□ 0.32
CDX2Q99626 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CDX2Q99626 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDX2Q99626 HNRNPA1P48-202ENST00000565308 961 ntBASIC17.05■□□□□ 0.32
CDX2Q99626 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CDX2Q99626 RN7SL725P-201ENST00000606439 259 ntBASIC17.05■□□□□ 0.32
CDX2Q99626 AL353726.2-201ENST00000623259 884 ntBASIC17.05■□□□□ 0.32
CDX2Q99626 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC17.05■□□□□ 0.32
CDX2Q99626 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.05■□□□□ 0.32
CDX2Q99626 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.05■□□□□ 0.32
CDX2Q99626 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.05■□□□□ 0.32
CDX2Q99626 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDX2Q99626 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDX2Q99626 AC108860.2-201ENST00000562760 2183 ntBASIC17.05■□□□□ 0.32
CDX2Q99626 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.05■□□□□ 0.32
CDX2Q99626 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDX2Q99626 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDX2Q99626 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDX2Q99626 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDX2Q99626 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDX2Q99626 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDX2Q99626 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.04■□□□□ 0.32
CDX2Q99626 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.04■□□□□ 0.32
CDX2Q99626 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.04■□□□□ 0.32
CDX2Q99626 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDX2Q99626 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC17.04■□□□□ 0.32
CDX2Q99626 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CDX2Q99626 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDX2Q99626 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CDX2Q99626 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms