Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.7■□□□□ 0.1
NR1H4Q96RI1 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
NR1H4Q96RI1 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
NR1H4Q96RI1 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NR1H4Q96RI1 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NR1H4Q96RI1 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NR1H4Q96RI1 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NR1H4Q96RI1 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.69■□□□□ 0.1
NR1H4Q96RI1 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NR1H4Q96RI1 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NR1H4Q96RI1 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.69■□□□□ 0.1
NR1H4Q96RI1 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.69■□□□□ 0.1
NR1H4Q96RI1 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
NR1H4Q96RI1 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
NR1H4Q96RI1 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NR1H4Q96RI1 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.69■□□□□ 0.1
NR1H4Q96RI1 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NR1H4Q96RI1 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NR1H4Q96RI1 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NR1H4Q96RI1 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NR1H4Q96RI1 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC15.69■□□□□ 0.1
NR1H4Q96RI1 AC098590.1-201ENST00000468126 897 ntBASIC15.69■□□□□ 0.1
NR1H4Q96RI1 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NR1H4Q96RI1 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.69■□□□□ 0.1
NR1H4Q96RI1 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC15.69■□□□□ 0.1
NR1H4Q96RI1 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.69■□□□□ 0.1
NR1H4Q96RI1 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC15.69■□□□□ 0.1
NR1H4Q96RI1 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC15.69■□□□□ 0.1
NR1H4Q96RI1 GRAP-204ENST00000573099 846 ntTSL 3 BASIC15.69■□□□□ 0.1
NR1H4Q96RI1 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC15.69■□□□□ 0.1
NR1H4Q96RI1 AC010240.3-201ENST00000607688 395 ntBASIC15.69■□□□□ 0.1
NR1H4Q96RI1 AP001412.1-201ENST00000608405 714 ntBASIC15.69■□□□□ 0.1
NR1H4Q96RI1 AC112497.1-201ENST00000624824 639 ntBASIC15.69■□□□□ 0.1
NR1H4Q96RI1 DECR2-212ENST00000627716 352 ntTSL 2 BASIC15.69■□□□□ 0.1
NR1H4Q96RI1 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.69■□□□□ 0.1
NR1H4Q96RI1 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NR1H4Q96RI1 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NR1H4Q96RI1 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
NR1H4Q96RI1 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NR1H4Q96RI1 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC15.69■□□□□ 0.1
NR1H4Q96RI1 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
NR1H4Q96RI1 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.69■□□□□ 0.1
NR1H4Q96RI1 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NR1H4Q96RI1 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NR1H4Q96RI1 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NR1H4Q96RI1 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NR1H4Q96RI1 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NR1H4Q96RI1 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
NR1H4Q96RI1 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
NR1H4Q96RI1 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NR1H4Q96RI1 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC15.68■□□□□ 0.1
NR1H4Q96RI1 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NR1H4Q96RI1 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
NR1H4Q96RI1 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.68■□□□□ 0.1
NR1H4Q96RI1 LINC00895-201ENST00000629028 1637 ntBASIC15.68■□□□□ 0.1
NR1H4Q96RI1 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.68■□□□□ 0.1
NR1H4Q96RI1 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NR1H4Q96RI1 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.68■□□□□ 0.1
NR1H4Q96RI1 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
NR1H4Q96RI1 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
NR1H4Q96RI1 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NR1H4Q96RI1 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
NR1H4Q96RI1 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NR1H4Q96RI1 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NR1H4Q96RI1 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NR1H4Q96RI1 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
NR1H4Q96RI1 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
NR1H4Q96RI1 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NR1H4Q96RI1 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NR1H4Q96RI1 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NR1H4Q96RI1 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.68■□□□□ 0.1
NR1H4Q96RI1 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NR1H4Q96RI1 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NR1H4Q96RI1 ABHD17AP1-201ENST00000358206 933 ntBASIC15.68■□□□□ 0.1
NR1H4Q96RI1 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NR1H4Q96RI1 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NR1H4Q96RI1 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.68■□□□□ 0.1
NR1H4Q96RI1 AC116562.2-201ENST00000507042 360 ntBASIC15.68■□□□□ 0.1
NR1H4Q96RI1 REXO2-216ENST00000544196 452 ntTSL 3 BASIC15.68■□□□□ 0.1
NR1H4Q96RI1 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NR1H4Q96RI1 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NR1H4Q96RI1 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.68■□□□□ 0.1
NR1H4Q96RI1 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
NR1H4Q96RI1 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
NR1H4Q96RI1 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
NR1H4Q96RI1 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.68■□□□□ 0.1
NR1H4Q96RI1 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
NR1H4Q96RI1 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.68■□□□□ 0.1
NR1H4Q96RI1 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NR1H4Q96RI1 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.68■□□□□ 0.1
NR1H4Q96RI1 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NR1H4Q96RI1 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.68■□□□□ 0.1
NR1H4Q96RI1 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.68■□□□□ 0.1
NR1H4Q96RI1 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NR1H4Q96RI1 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NR1H4Q96RI1 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
NR1H4Q96RI1 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
NR1H4Q96RI1 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NR1H4Q96RI1 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NR1H4Q96RI1 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms