Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC17Q96LX7 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC17Q96LX7 TSSK5P-201ENST00000423978 907 ntBASIC19.25■□□□□ 0.67
CCDC17Q96LX7 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC19.25■□□□□ 0.67
CCDC17Q96LX7 FAM207CP-201ENST00000443486 507 ntBASIC19.25■□□□□ 0.67
CCDC17Q96LX7 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC17Q96LX7 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC19.25■□□□□ 0.67
CCDC17Q96LX7 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC19.25■□□□□ 0.67
CCDC17Q96LX7 BANF1P1-201ENST00000553684 263 ntBASIC19.25■□□□□ 0.67
CCDC17Q96LX7 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC19.25■□□□□ 0.67
CCDC17Q96LX7 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC19.25■□□□□ 0.67
CCDC17Q96LX7 AC138761.1-201ENST00000584393 385 ntBASIC19.25■□□□□ 0.67
CCDC17Q96LX7 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC17Q96LX7 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC17Q96LX7 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC17Q96LX7 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC17Q96LX7 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC17Q96LX7 CETN4P-206ENST00000642099 2168 ntBASIC19.25■□□□□ 0.67
CCDC17Q96LX7 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC17Q96LX7 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC17Q96LX7 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC19.24■□□□□ 0.67
CCDC17Q96LX7 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC17Q96LX7 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC17Q96LX7 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC17Q96LX7 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC17Q96LX7 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC17Q96LX7 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC17Q96LX7 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC17Q96LX7 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC17Q96LX7 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC17Q96LX7 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC17Q96LX7 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC17Q96LX7 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CCDC17Q96LX7 UGT1A2P-201ENST00000454886 866 ntBASIC19.24■□□□□ 0.67
CCDC17Q96LX7 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC17Q96LX7 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC19.24■□□□□ 0.67
CCDC17Q96LX7 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC17Q96LX7 AC061975.2-201ENST00000581722 295 ntBASIC19.24■□□□□ 0.67
CCDC17Q96LX7 AL133215.2-201ENST00000609242 977 ntBASIC19.24■□□□□ 0.67
CCDC17Q96LX7 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC17Q96LX7 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC17Q96LX7 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CCDC17Q96LX7 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC17Q96LX7 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
CCDC17Q96LX7 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CCDC17Q96LX7 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC17Q96LX7 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC17Q96LX7 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC17Q96LX7 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
CCDC17Q96LX7 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CCDC17Q96LX7 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC17Q96LX7 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CCDC17Q96LX7 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC17Q96LX7 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC17Q96LX7 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CCDC17Q96LX7 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC19.23■□□□□ 0.67
CCDC17Q96LX7 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC17Q96LX7 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC19.23■□□□□ 0.67
CCDC17Q96LX7 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC19.23■□□□□ 0.67
CCDC17Q96LX7 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC19.23■□□□□ 0.67
CCDC17Q96LX7 MTND6P24-201ENST00000440466 518 ntBASIC19.23■□□□□ 0.67
CCDC17Q96LX7 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC19.23■□□□□ 0.67
CCDC17Q96LX7 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC19.23■□□□□ 0.67
CCDC17Q96LX7 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CCDC17Q96LX7 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC17Q96LX7 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC19.23■□□□□ 0.67
CCDC17Q96LX7 MPI-209ENST00000564003 1195 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC17Q96LX7 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC19.23■□□□□ 0.67
CCDC17Q96LX7 RN7SL204P-201ENST00000582831 262 ntBASIC19.23■□□□□ 0.67
CCDC17Q96LX7 AL589739.1-201ENST00000607720 493 ntBASIC19.23■□□□□ 0.67
CCDC17Q96LX7 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CCDC17Q96LX7 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CCDC17Q96LX7 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC17Q96LX7 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC17Q96LX7 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC17Q96LX7 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC17Q96LX7 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CCDC17Q96LX7 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC17Q96LX7 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CCDC17Q96LX7 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC17Q96LX7 AC078925.2-201ENST00000624013 1973 ntBASIC19.23■□□□□ 0.67
CCDC17Q96LX7 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CCDC17Q96LX7 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
CCDC17Q96LX7 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CCDC17Q96LX7 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC17Q96LX7 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC17Q96LX7 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC17Q96LX7 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC17Q96LX7 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC17Q96LX7 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CCDC17Q96LX7 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC17Q96LX7 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC19.22■□□□□ 0.67
CCDC17Q96LX7 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC17Q96LX7 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC17Q96LX7 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC17Q96LX7 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CCDC17Q96LX7 RAC2-204ENST00000406508 893 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC17Q96LX7 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC17Q96LX7 AC002472.2-201ENST00000442739 958 ntBASIC19.22■□□□□ 0.67
CCDC17Q96LX7 LHX6-205ENST00000464484 666 ntTSL 2 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms