Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC012569.1-201ENST00000591191 1524 ntBASIC19.41■□□□□ 0.7
TRIM47Q96LD4 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.4■□□□□ 0.7
TRIM47Q96LD4 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM47Q96LD4 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM47Q96LD4 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM47Q96LD4 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM47Q96LD4 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM47Q96LD4 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM47Q96LD4 MIR346-201ENST00000362234 95 ntBASIC19.4■□□□□ 0.7
TRIM47Q96LD4 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
TRIM47Q96LD4 ATP5G2P4-201ENST00000442175 420 ntBASIC19.4■□□□□ 0.7
TRIM47Q96LD4 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC19.4■□□□□ 0.7
TRIM47Q96LD4 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TRIM47Q96LD4 AC005412.3-201ENST00000580309 715 ntBASIC19.4■□□□□ 0.7
TRIM47Q96LD4 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC19.4■□□□□ 0.7
TRIM47Q96LD4 AL139327.4-201ENST00000612362 153 ntBASIC19.4■□□□□ 0.7
TRIM47Q96LD4 AL590560.3-201ENST00000623350 461 ntBASIC19.4■□□□□ 0.7
TRIM47Q96LD4 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TRIM47Q96LD4 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM47Q96LD4 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM47Q96LD4 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TRIM47Q96LD4 WASH6P-202ENST00000359512 1437 ntBASIC19.4■□□□□ 0.7
TRIM47Q96LD4 AC016396.2-201ENST00000562575 1417 ntBASIC19.4■□□□□ 0.7
TRIM47Q96LD4 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.4■□□□□ 0.7
TRIM47Q96LD4 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC19.4■□□□□ 0.7
TRIM47Q96LD4 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TRIM47Q96LD4 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM47Q96LD4 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM47Q96LD4 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.7
TRIM47Q96LD4 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
TRIM47Q96LD4 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
TRIM47Q96LD4 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.39■□□□□ 0.7
TRIM47Q96LD4 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM47Q96LD4 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM47Q96LD4 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM47Q96LD4 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
TRIM47Q96LD4 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM47Q96LD4 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM47Q96LD4 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM47Q96LD4 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
TRIM47Q96LD4 KRT17P7-201ENST00000451704 1104 ntBASIC19.39■□□□□ 0.69
TRIM47Q96LD4 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM47Q96LD4 AC022494.1-201ENST00000466044 728 ntBASIC19.39■□□□□ 0.69
TRIM47Q96LD4 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM47Q96LD4 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC19.39■□□□□ 0.69
TRIM47Q96LD4 AC027369.6-201ENST00000525520 931 ntBASIC19.39■□□□□ 0.69
TRIM47Q96LD4 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC19.39■□□□□ 0.69
TRIM47Q96LD4 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC19.39■□□□□ 0.69
TRIM47Q96LD4 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC19.39■□□□□ 0.69
TRIM47Q96LD4 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC19.39■□□□□ 0.69
TRIM47Q96LD4 AC027307.2-201ENST00000591252 911 ntBASIC19.39■□□□□ 0.69
TRIM47Q96LD4 AC008267.7-201ENST00000624570 1194 ntBASIC19.39■□□□□ 0.69
TRIM47Q96LD4 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.39■□□□□ 0.69
TRIM47Q96LD4 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM47Q96LD4 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.39■□□□□ 0.69
TRIM47Q96LD4 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM47Q96LD4 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM47Q96LD4 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.39■□□□□ 0.69
TRIM47Q96LD4 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19.39■□□□□ 0.69
TRIM47Q96LD4 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM47Q96LD4 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM47Q96LD4 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC19.39■□□□□ 0.69
TRIM47Q96LD4 AC099398.1-201ENST00000567919 2776 ntBASIC19.38■□□□□ 0.69
TRIM47Q96LD4 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM47Q96LD4 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
TRIM47Q96LD4 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
TRIM47Q96LD4 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM47Q96LD4 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM47Q96LD4 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM47Q96LD4 CALY-202ENST00000368555 783 ntTSL 2 BASIC19.38■□□□□ 0.69
TRIM47Q96LD4 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM47Q96LD4 SPTLC1P1-201ENST00000447199 261 ntBASIC19.38■□□□□ 0.69
TRIM47Q96LD4 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM47Q96LD4 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.38■□□□□ 0.69
TRIM47Q96LD4 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.38■□□□□ 0.69
TRIM47Q96LD4 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM47Q96LD4 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM47Q96LD4 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC19.38■□□□□ 0.69
TRIM47Q96LD4 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC19.38■□□□□ 0.69
TRIM47Q96LD4 AC004233.3-201ENST00000607794 1269 ntBASIC19.38■□□□□ 0.69
TRIM47Q96LD4 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM47Q96LD4 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM47Q96LD4 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
TRIM47Q96LD4 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
TRIM47Q96LD4 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM47Q96LD4 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM47Q96LD4 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.37■□□□□ 0.69
TRIM47Q96LD4 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
TRIM47Q96LD4 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM47Q96LD4 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM47Q96LD4 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM47Q96LD4 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
TRIM47Q96LD4 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM47Q96LD4 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC19.37■□□□□ 0.69
TRIM47Q96LD4 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM47Q96LD4 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM47Q96LD4 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM47Q96LD4 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM47Q96LD4 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC19.37■□□□□ 0.69
TRIM47Q96LD4 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms