Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DDX11Q96FC9 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DDX11Q96FC9 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
DDX11Q96FC9 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
DDX11Q96FC9 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DDX11Q96FC9 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DDX11Q96FC9 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
DDX11Q96FC9 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DDX11Q96FC9 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
DDX11Q96FC9 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
DDX11Q96FC9 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
DDX11Q96FC9 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
DDX11Q96FC9 AMT-206ENST00000458307 1860 ntTSL 2 BASIC19.74■□□□□ 0.75
DDX11Q96FC9 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DDX11Q96FC9 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
DDX11Q96FC9 AL031432.2-201ENST00000566714 459 ntBASIC19.74■□□□□ 0.75
DDX11Q96FC9 AL928711.1-201ENST00000570165 459 ntBASIC19.74■□□□□ 0.75
DDX11Q96FC9 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.74■□□□□ 0.75
DDX11Q96FC9 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
DDX11Q96FC9 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DDX11Q96FC9 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
DDX11Q96FC9 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DDX11Q96FC9 KRT8P49-201ENST00000604166 1432 ntBASIC19.74■□□□□ 0.75
DDX11Q96FC9 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
DDX11Q96FC9 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
DDX11Q96FC9 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DDX11Q96FC9 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
DDX11Q96FC9 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DDX11Q96FC9 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
DDX11Q96FC9 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DDX11Q96FC9 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
DDX11Q96FC9 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DDX11Q96FC9 ALOX12P2-203ENST00000570921 1945 ntBASIC19.73■□□□□ 0.75
DDX11Q96FC9 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DDX11Q96FC9 AC008741.2-201ENST00000612792 3115 ntBASIC19.73■□□□□ 0.75
DDX11Q96FC9 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
DDX11Q96FC9 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
DDX11Q96FC9 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.73■□□□□ 0.75
DDX11Q96FC9 PON3-203ENST00000427422 894 ntTSL 3 BASIC19.73■□□□□ 0.75
DDX11Q96FC9 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
DDX11Q96FC9 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC19.73■□□□□ 0.75
DDX11Q96FC9 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC19.73■□□□□ 0.75
DDX11Q96FC9 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
DDX11Q96FC9 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DDX11Q96FC9 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DDX11Q96FC9 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
DDX11Q96FC9 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC19.73■□□□□ 0.75
DDX11Q96FC9 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.73■□□□□ 0.75
DDX11Q96FC9 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.73■□□□□ 0.75
DDX11Q96FC9 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC19.73■□□□□ 0.75
DDX11Q96FC9 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DDX11Q96FC9 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
DDX11Q96FC9 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DDX11Q96FC9 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
DDX11Q96FC9 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC19.73■□□□□ 0.75
DDX11Q96FC9 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDX11Q96FC9 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
DDX11Q96FC9 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDX11Q96FC9 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.72■□□□□ 0.75
DDX11Q96FC9 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
DDX11Q96FC9 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
DDX11Q96FC9 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
DDX11Q96FC9 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDX11Q96FC9 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDX11Q96FC9 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDX11Q96FC9 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDX11Q96FC9 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
DDX11Q96FC9 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
DDX11Q96FC9 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
DDX11Q96FC9 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.72■□□□□ 0.75
DDX11Q96FC9 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDX11Q96FC9 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDX11Q96FC9 ACTG1P14-201ENST00000446382 1122 ntBASIC19.72■□□□□ 0.75
DDX11Q96FC9 PAWRP1-201ENST00000451083 565 ntBASIC19.72■□□□□ 0.75
DDX11Q96FC9 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDX11Q96FC9 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
DDX11Q96FC9 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
DDX11Q96FC9 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.72■□□□□ 0.75
DDX11Q96FC9 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.72■□□□□ 0.75
DDX11Q96FC9 AP002472.1-201ENST00000577490 586 ntBASIC19.72■□□□□ 0.75
DDX11Q96FC9 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
DDX11Q96FC9 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC19.72■□□□□ 0.75
DDX11Q96FC9 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDX11Q96FC9 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
DDX11Q96FC9 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDX11Q96FC9 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDX11Q96FC9 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDX11Q96FC9 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
DDX11Q96FC9 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDX11Q96FC9 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
DDX11Q96FC9 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.71■□□□□ 0.75
DDX11Q96FC9 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
DDX11Q96FC9 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
DDX11Q96FC9 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC19.71■□□□□ 0.75
DDX11Q96FC9 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
DDX11Q96FC9 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DDX11Q96FC9 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
DDX11Q96FC9 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
DDX11Q96FC9 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.71■□□□□ 0.75
DDX11Q96FC9 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms