Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 AC114501.2-201ENST00000439631 535 ntBASIC21.6■■□□□ 1.05
RAPGEF4Q8WZA2 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC21.6■■□□□ 1.05
RAPGEF4Q8WZA2 RN7SL752P-201ENST00000463779 287 ntBASIC21.6■■□□□ 1.05
RAPGEF4Q8WZA2 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
RAPGEF4Q8WZA2 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC21.6■■□□□ 1.05
RAPGEF4Q8WZA2 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC21.6■■□□□ 1.05
RAPGEF4Q8WZA2 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC21.6■■□□□ 1.05
RAPGEF4Q8WZA2 POLE2-203ENST00000553805 496 ntTSL 2 BASIC21.6■■□□□ 1.05
RAPGEF4Q8WZA2 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC21.6■■□□□ 1.05
RAPGEF4Q8WZA2 CHCHD2P3-201ENST00000603038 451 ntBASIC21.6■■□□□ 1.05
RAPGEF4Q8WZA2 AC008494.3-201ENST00000606615 944 ntBASIC21.6■■□□□ 1.05
RAPGEF4Q8WZA2 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
RAPGEF4Q8WZA2 IGHV3-72-202ENST00000621503 303 ntBASIC21.6■■□□□ 1.05
RAPGEF4Q8WZA2 AL033527.5-202ENST00000641632 1098 ntBASIC21.6■■□□□ 1.05
RAPGEF4Q8WZA2 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
RAPGEF4Q8WZA2 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
RAPGEF4Q8WZA2 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RAPGEF4Q8WZA2 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.6■■□□□ 1.05
RAPGEF4Q8WZA2 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC21.6■■□□□ 1.05
RAPGEF4Q8WZA2 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC21.6■■□□□ 1.05
RAPGEF4Q8WZA2 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RAPGEF4Q8WZA2 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RAPGEF4Q8WZA2 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
RAPGEF4Q8WZA2 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RAPGEF4Q8WZA2 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC21.59■■□□□ 1.05
RAPGEF4Q8WZA2 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RAPGEF4Q8WZA2 PP12613-201ENST00000424958 2230 ntBASIC21.59■■□□□ 1.05
RAPGEF4Q8WZA2 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
RAPGEF4Q8WZA2 OR6D1P-202ENST00000641007 5290 ntBASIC21.59■■□□□ 1.05
RAPGEF4Q8WZA2 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RAPGEF4Q8WZA2 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RAPGEF4Q8WZA2 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC21.59■■□□□ 1.05
RAPGEF4Q8WZA2 CD81-207ENST00000481687 890 ntTSL 2 BASIC21.59■■□□□ 1.05
RAPGEF4Q8WZA2 IGHV3-71-201ENST00000523324 359 ntBASIC21.59■■□□□ 1.05
RAPGEF4Q8WZA2 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC21.59■■□□□ 1.05
RAPGEF4Q8WZA2 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
RAPGEF4Q8WZA2 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC21.59■■□□□ 1.05
RAPGEF4Q8WZA2 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC21.59■■□□□ 1.05
RAPGEF4Q8WZA2 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC21.59■■□□□ 1.05
RAPGEF4Q8WZA2 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RAPGEF4Q8WZA2 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC21.59■■□□□ 1.05
RAPGEF4Q8WZA2 IMPDH1P4-201ENST00000445028 1534 ntBASIC21.59■■□□□ 1.05
RAPGEF4Q8WZA2 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
RAPGEF4Q8WZA2 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
RAPGEF4Q8WZA2 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RAPGEF4Q8WZA2 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RAPGEF4Q8WZA2 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
RAPGEF4Q8WZA2 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
RAPGEF4Q8WZA2 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC21.58■■□□□ 1.05
RAPGEF4Q8WZA2 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
RAPGEF4Q8WZA2 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC21.58■■□□□ 1.05
RAPGEF4Q8WZA2 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RAPGEF4Q8WZA2 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC21.58■■□□□ 1.05
RAPGEF4Q8WZA2 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RAPGEF4Q8WZA2 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC21.58■■□□□ 1.05
RAPGEF4Q8WZA2 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RAPGEF4Q8WZA2 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RAPGEF4Q8WZA2 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RAPGEF4Q8WZA2 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC21.58■■□□□ 1.04
RAPGEF4Q8WZA2 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC21.58■■□□□ 1.04
RAPGEF4Q8WZA2 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC21.58■■□□□ 1.04
RAPGEF4Q8WZA2 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
RAPGEF4Q8WZA2 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC21.58■■□□□ 1.04
RAPGEF4Q8WZA2 AL645728.1-201ENST00000366221 2101 ntBASIC21.58■■□□□ 1.04
RAPGEF4Q8WZA2 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
RAPGEF4Q8WZA2 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RAPGEF4Q8WZA2 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC21.57■■□□□ 1.04
RAPGEF4Q8WZA2 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RAPGEF4Q8WZA2 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RAPGEF4Q8WZA2 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RAPGEF4Q8WZA2 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC21.57■■□□□ 1.04
RAPGEF4Q8WZA2 AC007613.1-201ENST00000572811 2597 ntBASIC21.57■■□□□ 1.04
RAPGEF4Q8WZA2 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC21.57■■□□□ 1.04
RAPGEF4Q8WZA2 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC21.57■■□□□ 1.04
RAPGEF4Q8WZA2 GPAA1P2-202ENST00000606848 1787 ntBASIC21.57■■□□□ 1.04
RAPGEF4Q8WZA2 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC21.57■■□□□ 1.04
RAPGEF4Q8WZA2 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RAPGEF4Q8WZA2 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC21.57■■□□□ 1.04
RAPGEF4Q8WZA2 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
RAPGEF4Q8WZA2 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
RAPGEF4Q8WZA2 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC21.57■■□□□ 1.04
RAPGEF4Q8WZA2 AL512384.1-201ENST00000406683 331 ntBASIC21.57■■□□□ 1.04
RAPGEF4Q8WZA2 SPDYE17-201ENST00000412399 783 ntBASIC21.57■■□□□ 1.04
RAPGEF4Q8WZA2 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC21.57■■□□□ 1.04
RAPGEF4Q8WZA2 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC21.57■■□□□ 1.04
RAPGEF4Q8WZA2 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RAPGEF4Q8WZA2 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC21.57■■□□□ 1.04
RAPGEF4Q8WZA2 WASH4P-201ENST00000564273 1246 ntBASIC21.57■■□□□ 1.04
RAPGEF4Q8WZA2 ARL16-202ENST00000570561 768 ntTSL 2 BASIC21.57■■□□□ 1.04
RAPGEF4Q8WZA2 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC21.57■■□□□ 1.04
RAPGEF4Q8WZA2 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
RAPGEF4Q8WZA2 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC21.57■■□□□ 1.04
RAPGEF4Q8WZA2 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
RAPGEF4Q8WZA2 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RAPGEF4Q8WZA2 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC21.57■■□□□ 1.04
RAPGEF4Q8WZA2 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
RAPGEF4Q8WZA2 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RAPGEF4Q8WZA2 SLC7A15P-201ENST00000424028 1363 ntBASIC21.57■■□□□ 1.04
RAPGEF4Q8WZA2 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RAPGEF4Q8WZA2 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms