Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC25.55■■□□□ 1.68
CFAP43Q8NDM7 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC25.55■■□□□ 1.68
CFAP43Q8NDM7 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC25.55■■□□□ 1.68
CFAP43Q8NDM7 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CFAP43Q8NDM7 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CFAP43Q8NDM7 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CFAP43Q8NDM7 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CFAP43Q8NDM7 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC25.55■■□□□ 1.68
CFAP43Q8NDM7 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC25.55■■□□□ 1.68
CFAP43Q8NDM7 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC25.55■■□□□ 1.68
CFAP43Q8NDM7 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CFAP43Q8NDM7 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CFAP43Q8NDM7 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CFAP43Q8NDM7 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC25.54■■□□□ 1.68
CFAP43Q8NDM7 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CFAP43Q8NDM7 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CFAP43Q8NDM7 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
CFAP43Q8NDM7 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CFAP43Q8NDM7 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CFAP43Q8NDM7 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CFAP43Q8NDM7 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
CFAP43Q8NDM7 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
CFAP43Q8NDM7 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
CFAP43Q8NDM7 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
CFAP43Q8NDM7 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC25.54■■□□□ 1.68
CFAP43Q8NDM7 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CFAP43Q8NDM7 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CFAP43Q8NDM7 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC25.53■■□□□ 1.68
CFAP43Q8NDM7 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC25.53■■□□□ 1.68
CFAP43Q8NDM7 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CFAP43Q8NDM7 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC25.53■■□□□ 1.68
CFAP43Q8NDM7 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CFAP43Q8NDM7 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CFAP43Q8NDM7 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CFAP43Q8NDM7 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
CFAP43Q8NDM7 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CFAP43Q8NDM7 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC25.53■■□□□ 1.68
CFAP43Q8NDM7 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CFAP43Q8NDM7 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC25.53■■□□□ 1.68
CFAP43Q8NDM7 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC25.53■■□□□ 1.68
CFAP43Q8NDM7 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC25.53■■□□□ 1.68
CFAP43Q8NDM7 MYCLP2-201ENST00000449268 967 ntBASIC25.53■■□□□ 1.68
CFAP43Q8NDM7 RRP7BP-205ENST00000566851 833 ntBASIC25.53■■□□□ 1.68
CFAP43Q8NDM7 AC093726.1-201ENST00000608064 963 ntBASIC25.53■■□□□ 1.68
CFAP43Q8NDM7 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC25.53■■□□□ 1.68
CFAP43Q8NDM7 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CFAP43Q8NDM7 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
CFAP43Q8NDM7 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
CFAP43Q8NDM7 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC25.53■■□□□ 1.68
CFAP43Q8NDM7 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC25.52■■□□□ 1.68
CFAP43Q8NDM7 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CFAP43Q8NDM7 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
CFAP43Q8NDM7 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC25.52■■□□□ 1.68
CFAP43Q8NDM7 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CFAP43Q8NDM7 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
CFAP43Q8NDM7 CROCCP4-201ENST00000457096 498 ntBASIC25.52■■□□□ 1.68
CFAP43Q8NDM7 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC25.52■■□□□ 1.68
CFAP43Q8NDM7 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CFAP43Q8NDM7 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC25.52■■□□□ 1.68
CFAP43Q8NDM7 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CFAP43Q8NDM7 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
CFAP43Q8NDM7 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CFAP43Q8NDM7 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
CFAP43Q8NDM7 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC25.52■■□□□ 1.68
CFAP43Q8NDM7 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
CFAP43Q8NDM7 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CFAP43Q8NDM7 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CFAP43Q8NDM7 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CFAP43Q8NDM7 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC25.52■■□□□ 1.68
CFAP43Q8NDM7 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC25.52■■□□□ 1.68
CFAP43Q8NDM7 MIR1908-201ENST00000410394 80 ntBASIC25.52■■□□□ 1.68
CFAP43Q8NDM7 SERBP1P3-201ENST00000459980 809 ntBASIC25.52■■□□□ 1.68
CFAP43Q8NDM7 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
CFAP43Q8NDM7 PFAS-212ENST00000625942 396 ntTSL 5 BASIC25.52■■□□□ 1.68
CFAP43Q8NDM7 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC25.52■■□□□ 1.68
CFAP43Q8NDM7 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC25.52■■□□□ 1.68
CFAP43Q8NDM7 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.68
CFAP43Q8NDM7 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC25.51■■□□□ 1.67
CFAP43Q8NDM7 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
CFAP43Q8NDM7 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CFAP43Q8NDM7 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC25.51■■□□□ 1.67
CFAP43Q8NDM7 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC25.51■■□□□ 1.67
CFAP43Q8NDM7 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CFAP43Q8NDM7 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CFAP43Q8NDM7 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
CFAP43Q8NDM7 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CFAP43Q8NDM7 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CFAP43Q8NDM7 EML3-217ENST00000531557 2509 ntTSL 5 BASIC25.51■■□□□ 1.67
CFAP43Q8NDM7 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
CFAP43Q8NDM7 KRT8P12-202ENST00000472924 1397 ntBASIC25.51■■□□□ 1.67
CFAP43Q8NDM7 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CFAP43Q8NDM7 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC25.51■■□□□ 1.67
CFAP43Q8NDM7 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC25.51■■□□□ 1.67
CFAP43Q8NDM7 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC25.51■■□□□ 1.67
CFAP43Q8NDM7 AL589987.1-201ENST00000453380 819 ntBASIC25.51■■□□□ 1.67
CFAP43Q8NDM7 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC25.51■■□□□ 1.67
CFAP43Q8NDM7 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CFAP43Q8NDM7 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
CFAP43Q8NDM7 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CFAP43Q8NDM7 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC25.51■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms