Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
VPS8Q8N3P4 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC25.66■■□□□ 1.7
VPS8Q8N3P4 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
VPS8Q8N3P4 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC25.66■■□□□ 1.7
VPS8Q8N3P4 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
VPS8Q8N3P4 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC25.66■■□□□ 1.7
VPS8Q8N3P4 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC25.66■■□□□ 1.7
VPS8Q8N3P4 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC25.66■■□□□ 1.7
VPS8Q8N3P4 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
VPS8Q8N3P4 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
VPS8Q8N3P4 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
VPS8Q8N3P4 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC25.66■■□□□ 1.7
VPS8Q8N3P4 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
VPS8Q8N3P4 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
VPS8Q8N3P4 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
VPS8Q8N3P4 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC25.66■■□□□ 1.7
VPS8Q8N3P4 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
VPS8Q8N3P4 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
VPS8Q8N3P4 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
VPS8Q8N3P4 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
VPS8Q8N3P4 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
VPS8Q8N3P4 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC25.65■■□□□ 1.7
VPS8Q8N3P4 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
VPS8Q8N3P4 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC25.65■■□□□ 1.7
VPS8Q8N3P4 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
VPS8Q8N3P4 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
VPS8Q8N3P4 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC25.65■■□□□ 1.7
VPS8Q8N3P4 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC25.65■■□□□ 1.7
VPS8Q8N3P4 EEF1DP4-201ENST00000446006 880 ntBASIC25.65■■□□□ 1.7
VPS8Q8N3P4 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC25.65■■□□□ 1.7
VPS8Q8N3P4 AC093214.1-201ENST00000511688 1107 ntBASIC25.65■■□□□ 1.7
VPS8Q8N3P4 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC25.65■■□□□ 1.7
VPS8Q8N3P4 RN7SL828P-201ENST00000607615 303 ntBASIC25.65■■□□□ 1.7
VPS8Q8N3P4 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC25.65■■□□□ 1.7
VPS8Q8N3P4 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
VPS8Q8N3P4 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
VPS8Q8N3P4 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC25.65■■□□□ 1.7
VPS8Q8N3P4 AC100757.3-201ENST00000622361 1406 ntBASIC25.65■■□□□ 1.7
VPS8Q8N3P4 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC25.65■■□□□ 1.7
VPS8Q8N3P4 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
VPS8Q8N3P4 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC25.65■■□□□ 1.7
VPS8Q8N3P4 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
VPS8Q8N3P4 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
VPS8Q8N3P4 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
VPS8Q8N3P4 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
VPS8Q8N3P4 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
VPS8Q8N3P4 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
VPS8Q8N3P4 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC25.65■■□□□ 1.7
VPS8Q8N3P4 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC25.64■■□□□ 1.7
VPS8Q8N3P4 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
VPS8Q8N3P4 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
VPS8Q8N3P4 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
VPS8Q8N3P4 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
VPS8Q8N3P4 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
VPS8Q8N3P4 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC25.64■■□□□ 1.7
VPS8Q8N3P4 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
VPS8Q8N3P4 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
VPS8Q8N3P4 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
VPS8Q8N3P4 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
VPS8Q8N3P4 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC25.64■■□□□ 1.7
VPS8Q8N3P4 AL844908.2-201ENST00000609461 460 ntBASIC25.64■■□□□ 1.7
VPS8Q8N3P4 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC25.64■■□□□ 1.7
VPS8Q8N3P4 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC25.64■■□□□ 1.7
VPS8Q8N3P4 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
VPS8Q8N3P4 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
VPS8Q8N3P4 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
VPS8Q8N3P4 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC25.64■■□□□ 1.69
VPS8Q8N3P4 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
VPS8Q8N3P4 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
VPS8Q8N3P4 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
VPS8Q8N3P4 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
VPS8Q8N3P4 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
VPS8Q8N3P4 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
VPS8Q8N3P4 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
VPS8Q8N3P4 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC25.63■■□□□ 1.69
VPS8Q8N3P4 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
VPS8Q8N3P4 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
VPS8Q8N3P4 AC004890.2-204ENST00000481968 304 ntBASIC25.63■■□□□ 1.69
VPS8Q8N3P4 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
VPS8Q8N3P4 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
VPS8Q8N3P4 AL096865.1-201ENST00000606796 927 ntBASIC25.63■■□□□ 1.69
VPS8Q8N3P4 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC25.63■■□□□ 1.69
VPS8Q8N3P4 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
VPS8Q8N3P4 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC25.63■■□□□ 1.69
VPS8Q8N3P4 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
VPS8Q8N3P4 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
VPS8Q8N3P4 GRAMD4P3-201ENST00000621665 1669 ntBASIC25.63■■□□□ 1.69
VPS8Q8N3P4 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
VPS8Q8N3P4 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
VPS8Q8N3P4 MTHFR-217ENST00000641820 1569 ntBASIC25.63■■□□□ 1.69
VPS8Q8N3P4 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
VPS8Q8N3P4 SYS1-203ENST00000414310 795 ntTSL 3 BASIC25.63■■□□□ 1.69
VPS8Q8N3P4 MRPS18AP1-201ENST00000414458 589 ntBASIC25.63■■□□□ 1.69
VPS8Q8N3P4 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC25.63■■□□□ 1.69
VPS8Q8N3P4 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC25.63■■□□□ 1.69
VPS8Q8N3P4 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
VPS8Q8N3P4 LY6E-204ENST00000519546 971 ntTSL 2 BASIC25.63■■□□□ 1.69
VPS8Q8N3P4 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC25.63■■□□□ 1.69
VPS8Q8N3P4 DUT-210ENST00000559935 569 ntTSL 3 BASIC25.63■■□□□ 1.69
VPS8Q8N3P4 NAA60-208ENST00000570819 833 ntTSL 2 BASIC25.63■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms