Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.43■□□□□ 0.22
TMEFF1Q8IYR6 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEFF1Q8IYR6 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.43■□□□□ 0.22
TMEFF1Q8IYR6 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
TMEFF1Q8IYR6 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.43■□□□□ 0.22
TMEFF1Q8IYR6 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEFF1Q8IYR6 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEFF1Q8IYR6 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEFF1Q8IYR6 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEFF1Q8IYR6 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEFF1Q8IYR6 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TMEFF1Q8IYR6 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TMEFF1Q8IYR6 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.42■□□□□ 0.22
TMEFF1Q8IYR6 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEFF1Q8IYR6 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TMEFF1Q8IYR6 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TMEFF1Q8IYR6 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEFF1Q8IYR6 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEFF1Q8IYR6 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEFF1Q8IYR6 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEFF1Q8IYR6 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEFF1Q8IYR6 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEFF1Q8IYR6 DGCR5-201ENST00000399539 862 ntBASIC16.42■□□□□ 0.22
TMEFF1Q8IYR6 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEFF1Q8IYR6 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.42■□□□□ 0.22
TMEFF1Q8IYR6 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
TMEFF1Q8IYR6 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.42■□□□□ 0.22
TMEFF1Q8IYR6 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.42■□□□□ 0.22
TMEFF1Q8IYR6 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.42■□□□□ 0.22
TMEFF1Q8IYR6 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
TMEFF1Q8IYR6 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TMEFF1Q8IYR6 HILS1-202ENST00000545329 423 ntBASIC16.42■□□□□ 0.22
TMEFF1Q8IYR6 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.42■□□□□ 0.22
TMEFF1Q8IYR6 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TMEFF1Q8IYR6 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TMEFF1Q8IYR6 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.42■□□□□ 0.22
TMEFF1Q8IYR6 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.42■□□□□ 0.22
TMEFF1Q8IYR6 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEFF1Q8IYR6 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEFF1Q8IYR6 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.42■□□□□ 0.22
TMEFF1Q8IYR6 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.42■□□□□ 0.22
TMEFF1Q8IYR6 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TMEFF1Q8IYR6 AL671710.1-201ENST00000610245 2349 ntBASIC16.42■□□□□ 0.22
TMEFF1Q8IYR6 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEFF1Q8IYR6 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEFF1Q8IYR6 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEFF1Q8IYR6 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEFF1Q8IYR6 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEFF1Q8IYR6 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TMEFF1Q8IYR6 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEFF1Q8IYR6 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.42■□□□□ 0.22
TMEFF1Q8IYR6 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TMEFF1Q8IYR6 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TMEFF1Q8IYR6 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TMEFF1Q8IYR6 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TMEFF1Q8IYR6 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEFF1Q8IYR6 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEFF1Q8IYR6 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEFF1Q8IYR6 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEFF1Q8IYR6 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEFF1Q8IYR6 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC16.41■□□□□ 0.22
TMEFF1Q8IYR6 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.41■□□□□ 0.22
TMEFF1Q8IYR6 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TMEFF1Q8IYR6 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TMEFF1Q8IYR6 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEFF1Q8IYR6 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.41■□□□□ 0.22
TMEFF1Q8IYR6 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEFF1Q8IYR6 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEFF1Q8IYR6 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEFF1Q8IYR6 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEFF1Q8IYR6 AC098614.1-201ENST00000368528 745 ntBASIC16.41■□□□□ 0.22
TMEFF1Q8IYR6 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TMEFF1Q8IYR6 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEFF1Q8IYR6 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TMEFF1Q8IYR6 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.41■□□□□ 0.22
TMEFF1Q8IYR6 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.41■□□□□ 0.22
TMEFF1Q8IYR6 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.41■□□□□ 0.22
TMEFF1Q8IYR6 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.41■□□□□ 0.22
TMEFF1Q8IYR6 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.41■□□□□ 0.22
TMEFF1Q8IYR6 GIMAP3P-201ENST00000495150 836 ntBASIC16.41■□□□□ 0.22
TMEFF1Q8IYR6 AC098859.1-201ENST00000502915 1238 ntBASIC16.41■□□□□ 0.22
TMEFF1Q8IYR6 BANF1P1-201ENST00000553684 263 ntBASIC16.41■□□□□ 0.22
TMEFF1Q8IYR6 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.41■□□□□ 0.22
TMEFF1Q8IYR6 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC16.41■□□□□ 0.22
TMEFF1Q8IYR6 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.41■□□□□ 0.22
TMEFF1Q8IYR6 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.41■□□□□ 0.22
TMEFF1Q8IYR6 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.41■□□□□ 0.22
TMEFF1Q8IYR6 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEFF1Q8IYR6 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TMEFF1Q8IYR6 AL138688.1-201ENST00000624851 1594 ntBASIC16.41■□□□□ 0.22
TMEFF1Q8IYR6 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.41■□□□□ 0.22
TMEFF1Q8IYR6 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEFF1Q8IYR6 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
TMEFF1Q8IYR6 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.41■□□□□ 0.22
TMEFF1Q8IYR6 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEFF1Q8IYR6 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEFF1Q8IYR6 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEFF1Q8IYR6 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TMEFF1Q8IYR6 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TMEFF1Q8IYR6 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms