Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TRIM48Q8IWZ4 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM48Q8IWZ4 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
TRIM48Q8IWZ4 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM48Q8IWZ4 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM48Q8IWZ4 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.34■□□□□ 0.21
TRIM48Q8IWZ4 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.34■□□□□ 0.21
TRIM48Q8IWZ4 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM48Q8IWZ4 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.34■□□□□ 0.21
TRIM48Q8IWZ4 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM48Q8IWZ4 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRIM48Q8IWZ4 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRIM48Q8IWZ4 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRIM48Q8IWZ4 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRIM48Q8IWZ4 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.33■□□□□ 0.21
TRIM48Q8IWZ4 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.21
TRIM48Q8IWZ4 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TRIM48Q8IWZ4 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRIM48Q8IWZ4 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TRIM48Q8IWZ4 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TRIM48Q8IWZ4 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TRIM48Q8IWZ4 AC108860.2-201ENST00000562760 2183 ntBASIC16.33■□□□□ 0.2
TRIM48Q8IWZ4 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM48Q8IWZ4 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM48Q8IWZ4 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.33■□□□□ 0.2
TRIM48Q8IWZ4 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM48Q8IWZ4 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM48Q8IWZ4 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.33■□□□□ 0.2
TRIM48Q8IWZ4 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM48Q8IWZ4 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TRIM48Q8IWZ4 RNU1-129P-201ENST00000384064 167 ntBASIC16.33■□□□□ 0.2
TRIM48Q8IWZ4 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM48Q8IWZ4 RN7SL589P-201ENST00000481268 310 ntBASIC16.33■□□□□ 0.2
TRIM48Q8IWZ4 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.33■□□□□ 0.2
TRIM48Q8IWZ4 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.33■□□□□ 0.2
TRIM48Q8IWZ4 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
TRIM48Q8IWZ4 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
TRIM48Q8IWZ4 RARRES2P8-201ENST00000566335 367 ntBASIC16.33■□□□□ 0.2
TRIM48Q8IWZ4 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.33■□□□□ 0.2
TRIM48Q8IWZ4 U1.21-201ENST00000580816 167 ntBASIC16.33■□□□□ 0.2
TRIM48Q8IWZ4 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM48Q8IWZ4 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.33■□□□□ 0.2
TRIM48Q8IWZ4 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.33■□□□□ 0.2
TRIM48Q8IWZ4 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TRIM48Q8IWZ4 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM48Q8IWZ4 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.33■□□□□ 0.2
TRIM48Q8IWZ4 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM48Q8IWZ4 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.33■□□□□ 0.2
TRIM48Q8IWZ4 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM48Q8IWZ4 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TRIM48Q8IWZ4 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
TRIM48Q8IWZ4 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.32■□□□□ 0.2
TRIM48Q8IWZ4 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
TRIM48Q8IWZ4 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TRIM48Q8IWZ4 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TRIM48Q8IWZ4 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM48Q8IWZ4 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM48Q8IWZ4 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM48Q8IWZ4 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM48Q8IWZ4 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM48Q8IWZ4 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM48Q8IWZ4 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM48Q8IWZ4 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM48Q8IWZ4 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM48Q8IWZ4 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM48Q8IWZ4 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.32■□□□□ 0.2
TRIM48Q8IWZ4 CICP6-201ENST00000457191 2729 ntBASIC16.32■□□□□ 0.2
TRIM48Q8IWZ4 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.32■□□□□ 0.2
TRIM48Q8IWZ4 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM48Q8IWZ4 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.32■□□□□ 0.2
TRIM48Q8IWZ4 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM48Q8IWZ4 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.32■□□□□ 0.2
TRIM48Q8IWZ4 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM48Q8IWZ4 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM48Q8IWZ4 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.32■□□□□ 0.2
TRIM48Q8IWZ4 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.32■□□□□ 0.2
TRIM48Q8IWZ4 AC099522.2-201ENST00000607001 744 ntBASIC16.32■□□□□ 0.2
TRIM48Q8IWZ4 AC026120.1-201ENST00000611536 926 ntBASIC16.32■□□□□ 0.2
TRIM48Q8IWZ4 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
TRIM48Q8IWZ4 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.32■□□□□ 0.2
TRIM48Q8IWZ4 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM48Q8IWZ4 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
TRIM48Q8IWZ4 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM48Q8IWZ4 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM48Q8IWZ4 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM48Q8IWZ4 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM48Q8IWZ4 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM48Q8IWZ4 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.31■□□□□ 0.2
TRIM48Q8IWZ4 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM48Q8IWZ4 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TRIM48Q8IWZ4 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.31■□□□□ 0.2
TRIM48Q8IWZ4 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
TRIM48Q8IWZ4 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.31■□□□□ 0.2
TRIM48Q8IWZ4 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM48Q8IWZ4 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM48Q8IWZ4 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM48Q8IWZ4 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.31■□□□□ 0.2
TRIM48Q8IWZ4 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM48Q8IWZ4 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TRIM48Q8IWZ4 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms