Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PACS2Q86VP3 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PACS2Q86VP3 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PACS2Q86VP3 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PACS2Q86VP3 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PACS2Q86VP3 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PACS2Q86VP3 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PACS2Q86VP3 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC16.8■□□□□ 0.28
PACS2Q86VP3 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC16.8■□□□□ 0.28
PACS2Q86VP3 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PACS2Q86VP3 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PACS2Q86VP3 IER3-202ENST00000376377 1350 ntBASIC16.8■□□□□ 0.28
PACS2Q86VP3 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
PACS2Q86VP3 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.8■□□□□ 0.28
PACS2Q86VP3 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PACS2Q86VP3 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PACS2Q86VP3 AC006486.2-201ENST00000624246 2199 ntBASIC16.8■□□□□ 0.28
PACS2Q86VP3 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PACS2Q86VP3 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PACS2Q86VP3 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PACS2Q86VP3 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PACS2Q86VP3 MIR149-201ENST00000384879 89 ntBASIC16.8■□□□□ 0.28
PACS2Q86VP3 HLA-F-220ENST00000434407 884 ntBASIC16.8■□□□□ 0.28
PACS2Q86VP3 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.8■□□□□ 0.28
PACS2Q86VP3 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PACS2Q86VP3 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.8■□□□□ 0.28
PACS2Q86VP3 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.8■□□□□ 0.28
PACS2Q86VP3 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.8■□□□□ 0.28
PACS2Q86VP3 AC079602.3-201ENST00000623931 403 ntBASIC16.8■□□□□ 0.28
PACS2Q86VP3 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PACS2Q86VP3 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
PACS2Q86VP3 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PACS2Q86VP3 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.8■□□□□ 0.28
PACS2Q86VP3 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PACS2Q86VP3 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PACS2Q86VP3 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
PACS2Q86VP3 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PACS2Q86VP3 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PACS2Q86VP3 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PACS2Q86VP3 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PACS2Q86VP3 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PACS2Q86VP3 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC16.79■□□□□ 0.28
PACS2Q86VP3 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PACS2Q86VP3 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.79■□□□□ 0.28
PACS2Q86VP3 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PACS2Q86VP3 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PACS2Q86VP3 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PACS2Q86VP3 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PACS2Q86VP3 AC005332.1-201ENST00000577698 1310 ntBASIC16.79■□□□□ 0.28
PACS2Q86VP3 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PACS2Q86VP3 SLC25A1P3-201ENST00000395415 828 ntBASIC16.79■□□□□ 0.28
PACS2Q86VP3 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
PACS2Q86VP3 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PACS2Q86VP3 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
PACS2Q86VP3 AL645929.1-201ENST00000420084 975 ntBASIC16.79■□□□□ 0.28
PACS2Q86VP3 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PACS2Q86VP3 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.79■□□□□ 0.28
PACS2Q86VP3 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.79■□□□□ 0.28
PACS2Q86VP3 AC060766.1-201ENST00000590824 627 ntBASIC16.79■□□□□ 0.28
PACS2Q86VP3 AC026790.2-201ENST00000606282 430 ntBASIC16.79■□□□□ 0.28
PACS2Q86VP3 OR13I1P-201ENST00000609811 1264 ntBASIC16.79■□□□□ 0.28
PACS2Q86VP3 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC16.79■□□□□ 0.28
PACS2Q86VP3 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PACS2Q86VP3 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PACS2Q86VP3 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PACS2Q86VP3 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PACS2Q86VP3 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PACS2Q86VP3 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.79■□□□□ 0.28
PACS2Q86VP3 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PACS2Q86VP3 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
PACS2Q86VP3 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC16.79■□□□□ 0.28
PACS2Q86VP3 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PACS2Q86VP3 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
PACS2Q86VP3 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.79■□□□□ 0.28
PACS2Q86VP3 AC009102.3-201ENST00000623118 1491 ntBASIC16.79■□□□□ 0.28
PACS2Q86VP3 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.79■□□□□ 0.28
PACS2Q86VP3 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PACS2Q86VP3 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PACS2Q86VP3 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.79■□□□□ 0.28
PACS2Q86VP3 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.79■□□□□ 0.28
PACS2Q86VP3 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.79■□□□□ 0.28
PACS2Q86VP3 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
PACS2Q86VP3 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PACS2Q86VP3 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PACS2Q86VP3 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PACS2Q86VP3 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.78■□□□□ 0.28
PACS2Q86VP3 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PACS2Q86VP3 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.78■□□□□ 0.28
PACS2Q86VP3 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PACS2Q86VP3 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PACS2Q86VP3 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.78■□□□□ 0.28
PACS2Q86VP3 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PACS2Q86VP3 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
PACS2Q86VP3 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
PACS2Q86VP3 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.78■□□□□ 0.28
PACS2Q86VP3 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
PACS2Q86VP3 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PACS2Q86VP3 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PACS2Q86VP3 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.78■□□□□ 0.28
PACS2Q86VP3 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms