Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SCXQ7RTU7 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SCXQ7RTU7 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC11.09□□□□□ -0.63
SCXQ7RTU7 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC11.09□□□□□ -0.63
SCXQ7RTU7 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SCXQ7RTU7 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SCXQ7RTU7 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
SCXQ7RTU7 YBX2P1-201ENST00000394192 760 ntBASIC11.09□□□□□ -0.63
SCXQ7RTU7 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC11.09□□□□□ -0.63
SCXQ7RTU7 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC11.09□□□□□ -0.63
SCXQ7RTU7 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
SCXQ7RTU7 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
SCXQ7RTU7 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
SCXQ7RTU7 IMP4-203ENST00000409935 958 ntTSL 5 BASIC11.09□□□□□ -0.63
SCXQ7RTU7 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC11.09□□□□□ -0.63
SCXQ7RTU7 UPF3AP3-201ENST00000420996 769 ntBASIC11.09□□□□□ -0.63
SCXQ7RTU7 GPX1P2-201ENST00000429271 606 ntBASIC11.09□□□□□ -0.63
SCXQ7RTU7 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC11.09□□□□□ -0.63
SCXQ7RTU7 SIGLEC30P-201ENST00000455569 941 ntBASIC11.09□□□□□ -0.63
SCXQ7RTU7 AC092183.1-201ENST00000469884 875 ntBASIC11.09□□□□□ -0.63
SCXQ7RTU7 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC11.09□□□□□ -0.63
SCXQ7RTU7 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC11.09□□□□□ -0.63
SCXQ7RTU7 AC109462.3-201ENST00000573934 613 ntBASIC11.09□□□□□ -0.63
SCXQ7RTU7 MIR3687-2-201ENST00000577708 61 ntBASIC11.09□□□□□ -0.63
SCXQ7RTU7 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC11.09□□□□□ -0.63
SCXQ7RTU7 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC11.09□□□□□ -0.63
SCXQ7RTU7 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC11.09□□□□□ -0.63
SCXQ7RTU7 AL139424.1-201ENST00000607572 797 ntBASIC11.09□□□□□ -0.63
SCXQ7RTU7 AC064836.3-201ENST00000607928 673 ntBASIC11.09□□□□□ -0.63
SCXQ7RTU7 MIR3687-1-201ENST00000614492 61 ntBASIC11.09□□□□□ -0.63
SCXQ7RTU7 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC11.09□□□□□ -0.63
SCXQ7RTU7 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SCXQ7RTU7 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SCXQ7RTU7 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
SCXQ7RTU7 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SCXQ7RTU7 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC11.09□□□□□ -0.63
SCXQ7RTU7 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SCXQ7RTU7 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SCXQ7RTU7 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SCXQ7RTU7 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC11.09□□□□□ -0.63
SCXQ7RTU7 AC009949.1-201ENST00000623048 1830 ntBASIC11.09□□□□□ -0.63
SCXQ7RTU7 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SCXQ7RTU7 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SCXQ7RTU7 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SCXQ7RTU7 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SCXQ7RTU7 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SCXQ7RTU7 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SCXQ7RTU7 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
SCXQ7RTU7 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SCXQ7RTU7 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
SCXQ7RTU7 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
SCXQ7RTU7 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SCXQ7RTU7 BX276092.7-203ENST00000637198 1536 ntBASIC11.09□□□□□ -0.63
SCXQ7RTU7 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
SCXQ7RTU7 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
SCXQ7RTU7 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
SCXQ7RTU7 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SCXQ7RTU7 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.63
SCXQ7RTU7 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.63
SCXQ7RTU7 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC11.08□□□□□ -0.64
SCXQ7RTU7 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SCXQ7RTU7 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
SCXQ7RTU7 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC11.08□□□□□ -0.64
SCXQ7RTU7 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SCXQ7RTU7 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SCXQ7RTU7 AC092850.2-201ENST00000623821 2697 ntBASIC11.08□□□□□ -0.64
SCXQ7RTU7 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SCXQ7RTU7 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC11.08□□□□□ -0.64
SCXQ7RTU7 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
SCXQ7RTU7 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC11.08□□□□□ -0.64
SCXQ7RTU7 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC11.08□□□□□ -0.64
SCXQ7RTU7 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC11.08□□□□□ -0.64
SCXQ7RTU7 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC11.08□□□□□ -0.64
SCXQ7RTU7 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SCXQ7RTU7 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
SCXQ7RTU7 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
SCXQ7RTU7 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
SCXQ7RTU7 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
SCXQ7RTU7 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SCXQ7RTU7 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC11.08□□□□□ -0.64
SCXQ7RTU7 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SCXQ7RTU7 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SCXQ7RTU7 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC11.08□□□□□ -0.64
SCXQ7RTU7 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC11.08□□□□□ -0.64
SCXQ7RTU7 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
SCXQ7RTU7 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC11.08□□□□□ -0.64
SCXQ7RTU7 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC11.08□□□□□ -0.64
SCXQ7RTU7 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC11.08□□□□□ -0.64
SCXQ7RTU7 CYB561-217ENST00000582997 877 ntTSL 5 BASIC11.08□□□□□ -0.64
SCXQ7RTU7 AC019129.2-201ENST00000609837 1235 ntBASIC11.08□□□□□ -0.64
SCXQ7RTU7 AC004706.3-202ENST00000621574 984 ntBASIC11.08□□□□□ -0.64
SCXQ7RTU7 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC11.08□□□□□ -0.64
SCXQ7RTU7 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC11.08□□□□□ -0.64
SCXQ7RTU7 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SCXQ7RTU7 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SCXQ7RTU7 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
SCXQ7RTU7 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SCXQ7RTU7 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SCXQ7RTU7 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
SCXQ7RTU7 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC11.08□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms