Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
VSX2P58304 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
VSX2P58304 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
VSX2P58304 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.92■□□□□ 0.14
VSX2P58304 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.92■□□□□ 0.14
VSX2P58304 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
VSX2P58304 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
VSX2P58304 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
VSX2P58304 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
VSX2P58304 AL603756.1-201ENST00000606511 2163 ntBASIC15.92■□□□□ 0.14
VSX2P58304 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
VSX2P58304 RNF216P1-203ENST00000404404 2427 ntBASIC15.92■□□□□ 0.14
VSX2P58304 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
VSX2P58304 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
VSX2P58304 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.91■□□□□ 0.14
VSX2P58304 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VSX2P58304 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
VSX2P58304 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
VSX2P58304 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VSX2P58304 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.91■□□□□ 0.14
VSX2P58304 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
VSX2P58304 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
VSX2P58304 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.91■□□□□ 0.14
VSX2P58304 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
VSX2P58304 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VSX2P58304 SNX33P1-201ENST00000592116 1762 ntBASIC15.91■□□□□ 0.14
VSX2P58304 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.91■□□□□ 0.14
VSX2P58304 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
VSX2P58304 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.91■□□□□ 0.14
VSX2P58304 TFAMP1-201ENST00000412727 736 ntBASIC15.91■□□□□ 0.14
VSX2P58304 AC254562.1-201ENST00000417586 456 ntBASIC15.91■□□□□ 0.14
VSX2P58304 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.91■□□□□ 0.14
VSX2P58304 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.91■□□□□ 0.14
VSX2P58304 ADH5P3-201ENST00000433842 1137 ntBASIC15.91■□□□□ 0.14
VSX2P58304 SPDYE11-202ENST00000450699 704 ntBASIC15.91■□□□□ 0.14
VSX2P58304 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.91■□□□□ 0.14
VSX2P58304 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.91■□□□□ 0.14
VSX2P58304 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.91■□□□□ 0.14
VSX2P58304 FAM86C2P-203ENST00000528684 1004 ntBASIC15.91■□□□□ 0.14
VSX2P58304 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.91■□□□□ 0.14
VSX2P58304 SPDYE9P-201ENST00000570642 692 ntBASIC15.91■□□□□ 0.14
VSX2P58304 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.91■□□□□ 0.14
VSX2P58304 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.91■□□□□ 0.14
VSX2P58304 AC021097.1-201ENST00000607902 574 ntBASIC15.91■□□□□ 0.14
VSX2P58304 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VSX2P58304 AC026120.1-201ENST00000611536 926 ntBASIC15.91■□□□□ 0.14
VSX2P58304 SPDYE10P-202ENST00000612005 668 ntBASIC15.91■□□□□ 0.14
VSX2P58304 SPDYE8P-202ENST00000612377 668 ntBASIC15.91■□□□□ 0.14
VSX2P58304 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
VSX2P58304 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
VSX2P58304 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
VSX2P58304 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.91■□□□□ 0.14
VSX2P58304 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
VSX2P58304 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
VSX2P58304 KRT8P39-201ENST00000396270 1433 ntBASIC15.91■□□□□ 0.14
VSX2P58304 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VSX2P58304 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.91■□□□□ 0.14
VSX2P58304 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
VSX2P58304 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VSX2P58304 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.91■□□□□ 0.14
VSX2P58304 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
VSX2P58304 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
VSX2P58304 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.91■□□□□ 0.14
VSX2P58304 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VSX2P58304 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
VSX2P58304 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.91■□□□□ 0.14
VSX2P58304 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VSX2P58304 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VSX2P58304 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
VSX2P58304 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.9■□□□□ 0.14
VSX2P58304 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.9■□□□□ 0.14
VSX2P58304 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VSX2P58304 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VSX2P58304 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
VSX2P58304 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.9■□□□□ 0.14
VSX2P58304 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
VSX2P58304 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
VSX2P58304 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VSX2P58304 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VSX2P58304 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VSX2P58304 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VSX2P58304 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VSX2P58304 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VSX2P58304 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.9■□□□□ 0.14
VSX2P58304 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
VSX2P58304 CNN2P11-201ENST00000429351 262 ntBASIC15.9■□□□□ 0.14
VSX2P58304 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.9■□□□□ 0.14
VSX2P58304 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.9■□□□□ 0.14
VSX2P58304 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.9■□□□□ 0.14
VSX2P58304 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.9■□□□□ 0.14
VSX2P58304 KRT8P48-201ENST00000515599 1220 ntBASIC15.9■□□□□ 0.14
VSX2P58304 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.9■□□□□ 0.14
VSX2P58304 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
VSX2P58304 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.9■□□□□ 0.14
VSX2P58304 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VSX2P58304 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
VSX2P58304 AL135744.1-201ENST00000565098 629 ntBASIC15.9■□□□□ 0.14
VSX2P58304 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.9■□□□□ 0.14
VSX2P58304 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.9■□□□□ 0.14
VSX2P58304 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms