Protein–RNA interactions for Protein: P56817

BACE1, Beta-secretase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BACE1P56817 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.98■□□□□ 0.63
BACE1P56817 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.98■□□□□ 0.63
BACE1P56817 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
BACE1P56817 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BACE1P56817 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC18.98■□□□□ 0.63
BACE1P56817 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
BACE1P56817 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
BACE1P56817 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
BACE1P56817 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
BACE1P56817 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BACE1P56817 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BACE1P56817 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
BACE1P56817 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
BACE1P56817 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BACE1P56817 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BACE1P56817 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
BACE1P56817 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BACE1P56817 AC060834.1-201ENST00000443027 2032 ntBASIC18.97■□□□□ 0.63
BACE1P56817 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BACE1P56817 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.97■□□□□ 0.63
BACE1P56817 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
BACE1P56817 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC18.97■□□□□ 0.63
BACE1P56817 ARSEP1-201ENST00000420443 635 ntBASIC18.97■□□□□ 0.63
BACE1P56817 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC18.97■□□□□ 0.63
BACE1P56817 AC007274.1-201ENST00000439805 662 ntBASIC18.97■□□□□ 0.63
BACE1P56817 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC18.97■□□□□ 0.63
BACE1P56817 SDHAP3-202ENST00000515467 728 ntBASIC18.97■□□□□ 0.63
BACE1P56817 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
BACE1P56817 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.97■□□□□ 0.63
BACE1P56817 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC18.97■□□□□ 0.63
BACE1P56817 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.97■□□□□ 0.63
BACE1P56817 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BACE1P56817 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
BACE1P56817 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
BACE1P56817 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18.97■□□□□ 0.63
BACE1P56817 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BACE1P56817 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
BACE1P56817 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
BACE1P56817 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
BACE1P56817 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.97■□□□□ 0.63
BACE1P56817 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
BACE1P56817 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.97■□□□□ 0.63
BACE1P56817 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
BACE1P56817 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.96■□□□□ 0.63
BACE1P56817 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
BACE1P56817 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC18.96■□□□□ 0.63
BACE1P56817 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.96■□□□□ 0.63
BACE1P56817 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
BACE1P56817 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
BACE1P56817 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BACE1P56817 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.96■□□□□ 0.63
BACE1P56817 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BACE1P56817 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BACE1P56817 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
BACE1P56817 AP006294.1-201ENST00000415407 339 ntBASIC18.96■□□□□ 0.63
BACE1P56817 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.96■□□□□ 0.63
BACE1P56817 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
BACE1P56817 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC18.96■□□□□ 0.63
BACE1P56817 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.96■□□□□ 0.63
BACE1P56817 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
BACE1P56817 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BACE1P56817 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
BACE1P56817 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC18.96■□□□□ 0.63
BACE1P56817 SRD5A3P1-201ENST00000603021 949 ntBASIC18.96■□□□□ 0.63
BACE1P56817 IGHV3-72-202ENST00000621503 303 ntBASIC18.96■□□□□ 0.63
BACE1P56817 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
BACE1P56817 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
BACE1P56817 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
BACE1P56817 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
BACE1P56817 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BACE1P56817 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
BACE1P56817 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.96■□□□□ 0.63
BACE1P56817 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
BACE1P56817 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BACE1P56817 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
BACE1P56817 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.95■□□□□ 0.62
BACE1P56817 SLC7A15P-201ENST00000424028 1363 ntBASIC18.95■□□□□ 0.62
BACE1P56817 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.95■□□□□ 0.62
BACE1P56817 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
BACE1P56817 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
BACE1P56817 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BACE1P56817 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BACE1P56817 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BACE1P56817 AL139010.1-201ENST00000454878 894 ntBASIC18.95■□□□□ 0.62
BACE1P56817 INE1-201ENST00000456273 945 ntBASIC18.95■□□□□ 0.62
BACE1P56817 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.95■□□□□ 0.62
BACE1P56817 GIMAP3P-201ENST00000495150 836 ntBASIC18.95■□□□□ 0.62
BACE1P56817 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
BACE1P56817 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.95■□□□□ 0.62
BACE1P56817 POLE2-203ENST00000553805 496 ntTSL 2 BASIC18.95■□□□□ 0.62
BACE1P56817 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.95■□□□□ 0.62
BACE1P56817 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC18.95■□□□□ 0.62
BACE1P56817 AC008494.3-201ENST00000606615 944 ntBASIC18.95■□□□□ 0.62
BACE1P56817 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
BACE1P56817 MIR6752-201ENST00000618442 71 ntBASIC18.95■□□□□ 0.62
BACE1P56817 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BACE1P56817 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
BACE1P56817 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
BACE1P56817 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BACE1P56817 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms