Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMGCS2P54868 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
HMGCS2P54868 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
HMGCS2P54868 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HMGCS2P54868 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.03■□□□□ 0.64
HMGCS2P54868 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMGCS2P54868 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
HMGCS2P54868 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HMGCS2P54868 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HMGCS2P54868 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HMGCS2P54868 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
HMGCS2P54868 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
HMGCS2P54868 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
HMGCS2P54868 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HMGCS2P54868 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HMGCS2P54868 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HMGCS2P54868 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HMGCS2P54868 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC19.02■□□□□ 0.64
HMGCS2P54868 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HMGCS2P54868 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
HMGCS2P54868 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HMGCS2P54868 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
HMGCS2P54868 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HMGCS2P54868 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
HMGCS2P54868 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
HMGCS2P54868 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HMGCS2P54868 AC008494.3-201ENST00000606615 944 ntBASIC19.02■□□□□ 0.64
HMGCS2P54868 TEX48-202ENST00000612244 662 ntTSL 3 BASIC19.02■□□□□ 0.64
HMGCS2P54868 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HMGCS2P54868 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
HMGCS2P54868 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HMGCS2P54868 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
HMGCS2P54868 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
HMGCS2P54868 AL391825.1-201ENST00000457671 1364 ntBASIC19.02■□□□□ 0.64
HMGCS2P54868 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
HMGCS2P54868 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
HMGCS2P54868 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
HMGCS2P54868 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
HMGCS2P54868 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.02■□□□□ 0.63
HMGCS2P54868 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HMGCS2P54868 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC19.01■□□□□ 0.63
HMGCS2P54868 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
HMGCS2P54868 IMPDH1P4-201ENST00000445028 1534 ntBASIC19.01■□□□□ 0.63
HMGCS2P54868 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMGCS2P54868 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC19.01■□□□□ 0.63
HMGCS2P54868 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMGCS2P54868 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.01■□□□□ 0.63
HMGCS2P54868 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMGCS2P54868 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
HMGCS2P54868 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
HMGCS2P54868 AC087499.6-201ENST00000411576 835 ntBASIC19.01■□□□□ 0.63
HMGCS2P54868 AP006294.1-201ENST00000415407 339 ntBASIC19.01■□□□□ 0.63
HMGCS2P54868 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
HMGCS2P54868 GIMAP3P-201ENST00000495150 836 ntBASIC19.01■□□□□ 0.63
HMGCS2P54868 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
HMGCS2P54868 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC19.01■□□□□ 0.63
HMGCS2P54868 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC19.01■□□□□ 0.63
HMGCS2P54868 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HMGCS2P54868 POLE2-203ENST00000553805 496 ntTSL 2 BASIC19.01■□□□□ 0.63
HMGCS2P54868 ARL16-202ENST00000570561 768 ntTSL 2 BASIC19.01■□□□□ 0.63
HMGCS2P54868 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC19.01■□□□□ 0.63
HMGCS2P54868 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC19.01■□□□□ 0.63
HMGCS2P54868 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC19.01■□□□□ 0.63
HMGCS2P54868 MIR6752-201ENST00000618442 71 ntBASIC19.01■□□□□ 0.63
HMGCS2P54868 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMGCS2P54868 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMGCS2P54868 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.01■□□□□ 0.63
HMGCS2P54868 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMGCS2P54868 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HMGCS2P54868 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMGCS2P54868 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.01■□□□□ 0.63
HMGCS2P54868 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC19.01■□□□□ 0.63
HMGCS2P54868 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC19.01■□□□□ 0.63
HMGCS2P54868 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMGCS2P54868 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.01■□□□□ 0.63
HMGCS2P54868 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMGCS2P54868 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC19■□□□□ 0.63
HMGCS2P54868 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC19■□□□□ 0.63
HMGCS2P54868 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC19■□□□□ 0.63
HMGCS2P54868 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC19■□□□□ 0.63
HMGCS2P54868 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC19■□□□□ 0.63
HMGCS2P54868 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HMGCS2P54868 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
HMGCS2P54868 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HMGCS2P54868 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HMGCS2P54868 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
HMGCS2P54868 AC114501.2-201ENST00000439631 535 ntBASIC19■□□□□ 0.63
HMGCS2P54868 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC19■□□□□ 0.63
HMGCS2P54868 GPR53P-205ENST00000457298 1084 ntBASIC19■□□□□ 0.63
HMGCS2P54868 SERBP1P3-201ENST00000459980 809 ntBASIC19■□□□□ 0.63
HMGCS2P54868 RN7SL752P-201ENST00000463779 287 ntBASIC19■□□□□ 0.63
HMGCS2P54868 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC19■□□□□ 0.63
HMGCS2P54868 AC093004.1-201ENST00000508850 424 ntBASIC19■□□□□ 0.63
HMGCS2P54868 IGHV3-71-201ENST00000523324 359 ntBASIC19■□□□□ 0.63
HMGCS2P54868 HILS1-202ENST00000545329 423 ntBASIC19■□□□□ 0.63
HMGCS2P54868 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC19■□□□□ 0.63
HMGCS2P54868 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC19■□□□□ 0.63
HMGCS2P54868 AC020765.3-201ENST00000613051 740 ntBASIC19■□□□□ 0.63
HMGCS2P54868 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC19■□□□□ 0.63
HMGCS2P54868 AL033527.5-202ENST00000641632 1098 ntBASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms