Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HCFC1P51610 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HCFC1P51610 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC14.38□□□□□ -0.11
HCFC1P51610 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HCFC1P51610 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HCFC1P51610 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HCFC1P51610 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HCFC1P51610 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HCFC1P51610 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
HCFC1P51610 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HCFC1P51610 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HCFC1P51610 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HCFC1P51610 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.37□□□□□ -0.11
HCFC1P51610 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
HCFC1P51610 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HCFC1P51610 AC138969.3-201ENST00000546612 1459 ntBASIC14.37□□□□□ -0.11
HCFC1P51610 AC138932.2-201ENST00000548268 1459 ntBASIC14.37□□□□□ -0.11
HCFC1P51610 AC126755.4-201ENST00000549796 1459 ntBASIC14.37□□□□□ -0.11
HCFC1P51610 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HCFC1P51610 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
HCFC1P51610 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.37□□□□□ -0.11
HCFC1P51610 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HCFC1P51610 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HCFC1P51610 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HCFC1P51610 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HCFC1P51610 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.37□□□□□ -0.11
HCFC1P51610 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HCFC1P51610 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.37□□□□□ -0.11
HCFC1P51610 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HCFC1P51610 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.37□□□□□ -0.11
HCFC1P51610 AL589739.1-201ENST00000607720 493 ntBASIC14.37□□□□□ -0.11
HCFC1P51610 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
HCFC1P51610 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HCFC1P51610 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HCFC1P51610 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HCFC1P51610 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
HCFC1P51610 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
HCFC1P51610 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HCFC1P51610 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HCFC1P51610 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC14.37□□□□□ -0.11
HCFC1P51610 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.37□□□□□ -0.11
HCFC1P51610 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HCFC1P51610 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC14.36□□□□□ -0.11
HCFC1P51610 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HCFC1P51610 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
HCFC1P51610 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
HCFC1P51610 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.36□□□□□ -0.11
HCFC1P51610 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HCFC1P51610 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC14.36□□□□□ -0.11
HCFC1P51610 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HCFC1P51610 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HCFC1P51610 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HCFC1P51610 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HCFC1P51610 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
HCFC1P51610 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
HCFC1P51610 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.36□□□□□ -0.11
HCFC1P51610 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.36□□□□□ -0.11
HCFC1P51610 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
HCFC1P51610 AC135586.1-201ENST00000539323 574 ntBASIC14.36□□□□□ -0.11
HCFC1P51610 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.36□□□□□ -0.11
HCFC1P51610 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.36□□□□□ -0.11
HCFC1P51610 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.36□□□□□ -0.11
HCFC1P51610 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
HCFC1P51610 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.36□□□□□ -0.11
HCFC1P51610 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.36□□□□□ -0.11
HCFC1P51610 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.36□□□□□ -0.11
HCFC1P51610 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HCFC1P51610 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HCFC1P51610 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
HCFC1P51610 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HCFC1P51610 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC14.36□□□□□ -0.11
HCFC1P51610 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.36□□□□□ -0.11
HCFC1P51610 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HCFC1P51610 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HCFC1P51610 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
HCFC1P51610 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HCFC1P51610 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
HCFC1P51610 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HCFC1P51610 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
HCFC1P51610 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.36□□□□□ -0.11
HCFC1P51610 AL671710.1-201ENST00000610245 2349 ntBASIC14.36□□□□□ -0.11
HCFC1P51610 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HCFC1P51610 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
HCFC1P51610 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC14.36□□□□□ -0.11
HCFC1P51610 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.36□□□□□ -0.11
HCFC1P51610 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HCFC1P51610 SPDYE19P-201ENST00000338590 713 ntBASIC14.36□□□□□ -0.11
HCFC1P51610 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC14.36□□□□□ -0.11
HCFC1P51610 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HCFC1P51610 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
HCFC1P51610 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HCFC1P51610 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HCFC1P51610 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.36□□□□□ -0.11
HCFC1P51610 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.36□□□□□ -0.11
HCFC1P51610 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HCFC1P51610 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.36□□□□□ -0.11
HCFC1P51610 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.36□□□□□ -0.11
HCFC1P51610 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HCFC1P51610 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
HCFC1P51610 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms