Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.26■□□□□ 0.51
CDK7P50613 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC18.26■□□□□ 0.51
CDK7P50613 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDK7P50613 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.26■□□□□ 0.51
CDK7P50613 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC18.26■□□□□ 0.51
CDK7P50613 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.26■□□□□ 0.51
CDK7P50613 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC18.26■□□□□ 0.51
CDK7P50613 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC18.26■□□□□ 0.51
CDK7P50613 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.26■□□□□ 0.51
CDK7P50613 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDK7P50613 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC18.26■□□□□ 0.51
CDK7P50613 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.26■□□□□ 0.51
CDK7P50613 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.26■□□□□ 0.51
CDK7P50613 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDK7P50613 HTR7P1-202ENST00000624664 4411 ntBASIC18.26■□□□□ 0.51
CDK7P50613 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CDK7P50613 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDK7P50613 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.26■□□□□ 0.51
CDK7P50613 AL023806.1-201ENST00000603994 1649 ntBASIC18.26■□□□□ 0.51
CDK7P50613 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.26■□□□□ 0.51
CDK7P50613 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDK7P50613 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDK7P50613 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDK7P50613 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDK7P50613 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDK7P50613 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDK7P50613 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
CDK7P50613 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDK7P50613 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDK7P50613 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.25■□□□□ 0.51
CDK7P50613 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDK7P50613 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDK7P50613 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDK7P50613 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDK7P50613 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDK7P50613 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.25■□□□□ 0.51
CDK7P50613 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.25■□□□□ 0.51
CDK7P50613 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDK7P50613 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDK7P50613 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDK7P50613 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDK7P50613 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
CDK7P50613 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDK7P50613 MIR1909-201ENST00000411312 80 ntBASIC18.25■□□□□ 0.51
CDK7P50613 AC112492.5-201ENST00000421897 457 ntBASIC18.25■□□□□ 0.51
CDK7P50613 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC18.25■□□□□ 0.51
CDK7P50613 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDK7P50613 AC093004.1-201ENST00000508850 424 ntBASIC18.25■□□□□ 0.51
CDK7P50613 DOC2GP-202ENST00000514950 1163 ntBASIC18.25■□□□□ 0.51
CDK7P50613 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC18.25■□□□□ 0.51
CDK7P50613 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.25■□□□□ 0.51
CDK7P50613 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CDK7P50613 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.25■□□□□ 0.51
CDK7P50613 AL512361.1-201ENST00000554200 418 ntBASIC18.25■□□□□ 0.51
CDK7P50613 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.25■□□□□ 0.51
CDK7P50613 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.25■□□□□ 0.51
CDK7P50613 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.25■□□□□ 0.51
CDK7P50613 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.25■□□□□ 0.51
CDK7P50613 AC008494.3-201ENST00000606615 944 ntBASIC18.25■□□□□ 0.51
CDK7P50613 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDK7P50613 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.25■□□□□ 0.51
CDK7P50613 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
CDK7P50613 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDK7P50613 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.25■□□□□ 0.51
CDK7P50613 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDK7P50613 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDK7P50613 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CDK7P50613 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDK7P50613 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDK7P50613 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CDK7P50613 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDK7P50613 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CDK7P50613 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.24■□□□□ 0.51
CDK7P50613 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDK7P50613 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDK7P50613 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDK7P50613 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CDK7P50613 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.24■□□□□ 0.51
CDK7P50613 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC18.24■□□□□ 0.51
CDK7P50613 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC18.24■□□□□ 0.51
CDK7P50613 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CDK7P50613 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDK7P50613 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.24■□□□□ 0.51
CDK7P50613 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.24■□□□□ 0.51
CDK7P50613 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDK7P50613 AC011495.1-201ENST00000498085 584 ntBASIC18.24■□□□□ 0.51
CDK7P50613 RNA5SP410-201ENST00000516285 106 ntBASIC18.24■□□□□ 0.51
CDK7P50613 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.24■□□□□ 0.51
CDK7P50613 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.24■□□□□ 0.51
CDK7P50613 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC18.24■□□□□ 0.51
CDK7P50613 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18.24■□□□□ 0.51
CDK7P50613 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.24■□□□□ 0.51
CDK7P50613 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
CDK7P50613 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDK7P50613 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDK7P50613 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDK7P50613 AC141586.5-201ENST00000624546 2050 ntBASIC18.24■□□□□ 0.51
CDK7P50613 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDK7P50613 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.24■□□□□ 0.51
CDK7P50613 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms