Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC19.64■□□□□ 0.73
TNNI2P48788 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC19.64■□□□□ 0.73
TNNI2P48788 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TNNI2P48788 TMPRSS11CP-201ENST00000453277 683 ntBASIC19.64■□□□□ 0.73
TNNI2P48788 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC19.64■□□□□ 0.73
TNNI2P48788 AC009407.1-201ENST00000568958 598 ntBASIC19.64■□□□□ 0.73
TNNI2P48788 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC19.64■□□□□ 0.73
TNNI2P48788 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC19.64■□□□□ 0.73
TNNI2P48788 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TNNI2P48788 AL844908.2-201ENST00000609461 460 ntBASIC19.64■□□□□ 0.73
TNNI2P48788 AC008738.7-201ENST00000609744 511 ntBASIC19.64■□□□□ 0.73
TNNI2P48788 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
TNNI2P48788 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TNNI2P48788 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TNNI2P48788 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.64■□□□□ 0.73
TNNI2P48788 AL023806.1-201ENST00000603994 1649 ntBASIC19.64■□□□□ 0.73
TNNI2P48788 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC19.64■□□□□ 0.73
TNNI2P48788 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TNNI2P48788 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19.64■□□□□ 0.73
TNNI2P48788 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TNNI2P48788 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TNNI2P48788 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TNNI2P48788 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TNNI2P48788 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TNNI2P48788 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNNI2P48788 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TNNI2P48788 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNNI2P48788 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNNI2P48788 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC19.63■□□□□ 0.73
TNNI2P48788 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNNI2P48788 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.63■□□□□ 0.73
TNNI2P48788 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNNI2P48788 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TNNI2P48788 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC19.63■□□□□ 0.73
TNNI2P48788 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TNNI2P48788 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC19.63■□□□□ 0.73
TNNI2P48788 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
TNNI2P48788 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNNI2P48788 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TNNI2P48788 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TNNI2P48788 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TNNI2P48788 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TNNI2P48788 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TNNI2P48788 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC19.63■□□□□ 0.73
TNNI2P48788 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNNI2P48788 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TNNI2P48788 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNNI2P48788 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNNI2P48788 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC19.63■□□□□ 0.73
TNNI2P48788 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC19.63■□□□□ 0.73
TNNI2P48788 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNNI2P48788 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC19.63■□□□□ 0.73
TNNI2P48788 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC19.63■□□□□ 0.73
TNNI2P48788 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNNI2P48788 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNNI2P48788 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNNI2P48788 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.63■□□□□ 0.73
TNNI2P48788 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.63■□□□□ 0.73
TNNI2P48788 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNNI2P48788 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNNI2P48788 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TNNI2P48788 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
TNNI2P48788 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNNI2P48788 GOLGA2P9-201ENST00000596977 1937 ntBASIC19.63■□□□□ 0.73
TNNI2P48788 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
TNNI2P48788 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TNNI2P48788 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC19.62■□□□□ 0.73
TNNI2P48788 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TNNI2P48788 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TNNI2P48788 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
TNNI2P48788 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
TNNI2P48788 AC007541.1-201ENST00000570282 1469 ntBASIC19.62■□□□□ 0.73
TNNI2P48788 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC19.62■□□□□ 0.73
TNNI2P48788 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC19.62■□□□□ 0.73
TNNI2P48788 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TNNI2P48788 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
TNNI2P48788 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
TNNI2P48788 RPS19-201ENST00000221975 500 ntTSL 3 BASIC19.62■□□□□ 0.73
TNNI2P48788 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
TNNI2P48788 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TNNI2P48788 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC19.62■□□□□ 0.73
TNNI2P48788 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TNNI2P48788 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TNNI2P48788 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TNNI2P48788 AL353779.1-201ENST00000434793 351 ntBASIC19.62■□□□□ 0.73
TNNI2P48788 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC19.62■□□□□ 0.73
TNNI2P48788 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC19.62■□□□□ 0.73
TNNI2P48788 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC19.62■□□□□ 0.73
TNNI2P48788 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC19.62■□□□□ 0.73
TNNI2P48788 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC19.62■□□□□ 0.73
TNNI2P48788 TP53TG3HP-202ENST00000569755 579 ntBASIC19.62■□□□□ 0.73
TNNI2P48788 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC19.62■□□□□ 0.73
TNNI2P48788 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
TNNI2P48788 AL132655.2-201ENST00000596276 594 ntBASIC19.62■□□□□ 0.73
TNNI2P48788 AL359881.2-201ENST00000602973 570 ntBASIC19.62■□□□□ 0.73
TNNI2P48788 AL008721.1-201ENST00000609964 604 ntBASIC19.62■□□□□ 0.73
TNNI2P48788 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC19.62■□□□□ 0.73
TNNI2P48788 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC19.62■□□□□ 0.73
TNNI2P48788 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TNNI2P48788 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms