Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.78■□□□□ 0.12
RORAP35398 RBPMS2P1-201ENST00000437762 623 ntBASIC15.78■□□□□ 0.12
RORAP35398 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.78■□□□□ 0.12
RORAP35398 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.78■□□□□ 0.12
RORAP35398 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.78■□□□□ 0.12
RORAP35398 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.78■□□□□ 0.12
RORAP35398 AC067863.1-201ENST00000494933 530 ntBASIC15.78■□□□□ 0.12
RORAP35398 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.78■□□□□ 0.12
RORAP35398 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RORAP35398 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
RORAP35398 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.78■□□□□ 0.12
RORAP35398 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
RORAP35398 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RORAP35398 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RORAP35398 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RORAP35398 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.78■□□□□ 0.12
RORAP35398 AC021097.1-201ENST00000607902 574 ntBASIC15.78■□□□□ 0.12
RORAP35398 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
RORAP35398 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RORAP35398 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
RORAP35398 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RORAP35398 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
RORAP35398 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.78■□□□□ 0.12
RORAP35398 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
RORAP35398 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
RORAP35398 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RORAP35398 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RORAP35398 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RORAP35398 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RORAP35398 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RORAP35398 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RORAP35398 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RORAP35398 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RORAP35398 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RORAP35398 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
RORAP35398 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.77■□□□□ 0.12
RORAP35398 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.77■□□□□ 0.12
RORAP35398 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RORAP35398 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.77■□□□□ 0.12
RORAP35398 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
RORAP35398 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RORAP35398 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
RORAP35398 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RORAP35398 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
RORAP35398 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
RORAP35398 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.77■□□□□ 0.12
RORAP35398 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
RORAP35398 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RORAP35398 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RORAP35398 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
RORAP35398 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.12
RORAP35398 MIR346-201ENST00000362234 95 ntBASIC15.77■□□□□ 0.12
RORAP35398 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
RORAP35398 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RORAP35398 CNN2P2-201ENST00000443536 909 ntBASIC15.77■□□□□ 0.12
RORAP35398 CNN2P3-201ENST00000450201 906 ntBASIC15.77■□□□□ 0.12
RORAP35398 AC069262.1-201ENST00000539058 672 ntBASIC15.77■□□□□ 0.12
RORAP35398 AC051619.7-201ENST00000568314 623 ntBASIC15.77■□□□□ 0.12
RORAP35398 AP000842.3-202ENST00000569238 1080 ntBASIC15.77■□□□□ 0.12
RORAP35398 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.77■□□□□ 0.12
RORAP35398 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.77■□□□□ 0.12
RORAP35398 AL136317.3-201ENST00000618497 906 ntBASIC15.77■□□□□ 0.12
RORAP35398 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
RORAP35398 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.77■□□□□ 0.12
RORAP35398 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.77■□□□□ 0.12
RORAP35398 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RORAP35398 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RORAP35398 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RORAP35398 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
RORAP35398 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RORAP35398 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RORAP35398 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RORAP35398 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
RORAP35398 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RORAP35398 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
RORAP35398 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RORAP35398 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RORAP35398 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.76■□□□□ 0.11
RORAP35398 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RORAP35398 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.76■□□□□ 0.11
RORAP35398 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RORAP35398 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
RORAP35398 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.76■□□□□ 0.11
RORAP35398 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
RORAP35398 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
RORAP35398 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RORAP35398 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
RORAP35398 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.76■□□□□ 0.11
RORAP35398 SPDYE14P-201ENST00000442619 822 ntBASIC15.76■□□□□ 0.11
RORAP35398 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.76■□□□□ 0.11
RORAP35398 SLC25A39P2-201ENST00000537614 270 ntBASIC15.76■□□□□ 0.11
RORAP35398 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.76■□□□□ 0.11
RORAP35398 SPCS2P1-201ENST00000561636 679 ntBASIC15.76■□□□□ 0.11
RORAP35398 AC026150.2-201ENST00000564693 1156 ntBASIC15.76■□□□□ 0.11
RORAP35398 AC027307.2-201ENST00000591252 911 ntBASIC15.76■□□□□ 0.11
RORAP35398 AC005498.2-205ENST00000593218 784 ntBASIC15.76■□□□□ 0.11
RORAP35398 AC011467.4-201ENST00000594891 528 ntBASIC15.76■□□□□ 0.11
RORAP35398 LINC02084-201ENST00000606069 1096 ntBASIC15.76■□□□□ 0.11
RORAP35398 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
RORAP35398 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms