Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CKS2P33552 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
CKS2P33552 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
CKS2P33552 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
CKS2P33552 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CKS2P33552 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC12.28□□□□□ -0.44
CKS2P33552 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC12.28□□□□□ -0.44
CKS2P33552 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC12.28□□□□□ -0.44
CKS2P33552 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC12.28□□□□□ -0.44
CKS2P33552 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC12.28□□□□□ -0.44
CKS2P33552 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC12.28□□□□□ -0.44
CKS2P33552 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC12.28□□□□□ -0.44
CKS2P33552 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC12.28□□□□□ -0.44
CKS2P33552 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC12.28□□□□□ -0.44
CKS2P33552 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC12.28□□□□□ -0.44
CKS2P33552 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC12.28□□□□□ -0.44
CKS2P33552 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC12.28□□□□□ -0.44
CKS2P33552 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC12.28□□□□□ -0.44
CKS2P33552 AL136038.4-201ENST00000603606 1261 ntBASIC12.28□□□□□ -0.44
CKS2P33552 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CKS2P33552 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
CKS2P33552 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CKS2P33552 AP005117.1-202ENST00000581724 1908 ntBASIC12.28□□□□□ -0.44
CKS2P33552 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CKS2P33552 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CKS2P33552 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
CKS2P33552 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CKS2P33552 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC12.28□□□□□ -0.44
CKS2P33552 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC12.28□□□□□ -0.44
CKS2P33552 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CKS2P33552 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CKS2P33552 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC12.28□□□□□ -0.44
CKS2P33552 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CKS2P33552 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC12.28□□□□□ -0.44
CKS2P33552 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
CKS2P33552 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CKS2P33552 AL391807.1-203ENST00000604392 2365 ntBASIC12.28□□□□□ -0.44
CKS2P33552 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CKS2P33552 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC12.28□□□□□ -0.44
CKS2P33552 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CKS2P33552 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
CKS2P33552 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CKS2P33552 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC12.28□□□□□ -0.44
CKS2P33552 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC12.28□□□□□ -0.44
CKS2P33552 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CKS2P33552 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CKS2P33552 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
CKS2P33552 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC12.27□□□□□ -0.44
CKS2P33552 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CKS2P33552 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
CKS2P33552 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CKS2P33552 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CKS2P33552 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CKS2P33552 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CKS2P33552 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CKS2P33552 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CKS2P33552 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC12.27□□□□□ -0.44
CKS2P33552 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
CKS2P33552 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CKS2P33552 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
CKS2P33552 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CKS2P33552 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CKS2P33552 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC12.27□□□□□ -0.44
CKS2P33552 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CKS2P33552 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CKS2P33552 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
CKS2P33552 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CKS2P33552 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
CKS2P33552 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC12.27□□□□□ -0.45
CKS2P33552 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC12.27□□□□□ -0.45
CKS2P33552 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC12.27□□□□□ -0.45
CKS2P33552 HLA-L-209ENST00000420110 1011 ntBASIC12.27□□□□□ -0.45
CKS2P33552 AC012618.2-201ENST00000428058 849 ntBASIC12.27□□□□□ -0.45
CKS2P33552 AL390955.1-201ENST00000428694 934 ntBASIC12.27□□□□□ -0.45
CKS2P33552 AC103564.2-201ENST00000432853 1299 ntBASIC12.27□□□□□ -0.45
CKS2P33552 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
CKS2P33552 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC12.27□□□□□ -0.45
CKS2P33552 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC12.27□□□□□ -0.45
CKS2P33552 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC12.27□□□□□ -0.45
CKS2P33552 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC12.27□□□□□ -0.45
CKS2P33552 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CKS2P33552 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CKS2P33552 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC12.27□□□□□ -0.45
CKS2P33552 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CKS2P33552 EGLN1P1-201ENST00000531623 762 ntBASIC12.27□□□□□ -0.45
CKS2P33552 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC12.27□□□□□ -0.45
CKS2P33552 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC12.27□□□□□ -0.45
CKS2P33552 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
CKS2P33552 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CKS2P33552 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC12.27□□□□□ -0.45
CKS2P33552 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC12.27□□□□□ -0.45
CKS2P33552 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CKS2P33552 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC12.27□□□□□ -0.45
CKS2P33552 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CKS2P33552 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
CKS2P33552 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CKS2P33552 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC12.27□□□□□ -0.45
CKS2P33552 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CKS2P33552 AC006449.6-201ENST00000612330 2296 ntBASIC12.27□□□□□ -0.45
CKS2P33552 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms