Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
RXRBP28702 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RXRBP28702 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC21.36■■□□□ 1.01
RXRBP28702 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC21.36■■□□□ 1.01
RXRBP28702 AC093724.1-201ENST00000448659 1027 ntBASIC21.36■■□□□ 1.01
RXRBP28702 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC21.36■■□□□ 1.01
RXRBP28702 COX5BP1-201ENST00000507622 393 ntBASIC21.36■■□□□ 1.01
RXRBP28702 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC21.36■■□□□ 1.01
RXRBP28702 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC21.36■■□□□ 1.01
RXRBP28702 PGAM1P5-201ENST00000548011 764 ntBASIC21.36■■□□□ 1.01
RXRBP28702 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC21.36■■□□□ 1.01
RXRBP28702 AC120045.2-201ENST00000567334 178 ntBASIC21.36■■□□□ 1.01
RXRBP28702 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC21.36■■□□□ 1.01
RXRBP28702 AC148477.9-201ENST00000623974 539 ntBASIC21.36■■□□□ 1.01
RXRBP28702 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC21.36■■□□□ 1.01
RXRBP28702 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
RXRBP28702 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC21.36■■□□□ 1.01
RXRBP28702 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
RXRBP28702 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RXRBP28702 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
RXRBP28702 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RXRBP28702 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
RXRBP28702 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC21.35■■□□□ 1.01
RXRBP28702 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RXRBP28702 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
RXRBP28702 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC21.35■■□□□ 1.01
RXRBP28702 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC21.35■■□□□ 1.01
RXRBP28702 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC21.35■■□□□ 1.01
RXRBP28702 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RXRBP28702 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RXRBP28702 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RXRBP28702 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC21.35■■□□□ 1.01
RXRBP28702 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RXRBP28702 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RXRBP28702 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC21.35■■□□□ 1.01
RXRBP28702 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RXRBP28702 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RXRBP28702 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
RXRBP28702 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RXRBP28702 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
RXRBP28702 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RXRBP28702 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
RXRBP28702 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RXRBP28702 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RXRBP28702 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RXRBP28702 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RXRBP28702 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RXRBP28702 PKIG-203ENST00000372887 769 ntTSL 3 BASIC21.34■■□□□ 1.01
RXRBP28702 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC21.34■■□□□ 1.01
RXRBP28702 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RXRBP28702 VMO1-203ENST00000416307 712 ntTSL 2 BASIC21.34■■□□□ 1.01
RXRBP28702 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RXRBP28702 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC21.34■■□□□ 1.01
RXRBP28702 SUPT4H1P2-201ENST00000501248 353 ntBASIC21.34■■□□□ 1.01
RXRBP28702 AC126915.1-201ENST00000522847 1038 ntBASIC21.34■■□□□ 1.01
RXRBP28702 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC21.34■■□□□ 1.01
RXRBP28702 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC21.34■■□□□ 1.01
RXRBP28702 AC005252.2-201ENST00000624630 1141 ntBASIC21.34■■□□□ 1.01
RXRBP28702 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC21.34■■□□□ 1.01
RXRBP28702 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
RXRBP28702 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RXRBP28702 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RXRBP28702 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RXRBP28702 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
RXRBP28702 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RXRBP28702 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RXRBP28702 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
RXRBP28702 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RXRBP28702 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RXRBP28702 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC21.33■■□□□ 1.01
RXRBP28702 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RXRBP28702 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RXRBP28702 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RXRBP28702 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
RXRBP28702 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC21.33■■□□□ 1.01
RXRBP28702 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC21.33■■□□□ 1.01
RXRBP28702 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC21.33■■□□□ 1.01
RXRBP28702 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
RXRBP28702 TBCB-211ENST00000589996 724 ntTSL 3 BASIC21.33■■□□□ 1.01
RXRBP28702 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC21.33■■□□□ 1.01
RXRBP28702 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC21.33■■□□□ 1.01
RXRBP28702 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RXRBP28702 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC21.33■■□□□ 1
RXRBP28702 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
RXRBP28702 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC21.33■■□□□ 1
RXRBP28702 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
RXRBP28702 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC21.33■■□□□ 1
RXRBP28702 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC21.33■■□□□ 1
RXRBP28702 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC21.33■■□□□ 1
RXRBP28702 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC21.32■■□□□ 1
RXRBP28702 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC21.32■■□□□ 1
RXRBP28702 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
RXRBP28702 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
RXRBP28702 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC21.32■■□□□ 1
RXRBP28702 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RXRBP28702 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RXRBP28702 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC21.32■■□□□ 1
RXRBP28702 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC21.32■■□□□ 1
RXRBP28702 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RXRBP28702 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms