Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ATF1P18846 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
ATF1P18846 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
ATF1P18846 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ATF1P18846 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.64□□□□□ -0.07
ATF1P18846 NUS1P2-201ENST00000417358 873 ntBASIC14.64□□□□□ -0.07
ATF1P18846 RBSN-204ENST00000449050 903 ntTSL 2 BASIC14.64□□□□□ -0.07
ATF1P18846 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC14.64□□□□□ -0.07
ATF1P18846 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC14.64□□□□□ -0.07
ATF1P18846 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC14.64□□□□□ -0.07
ATF1P18846 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.64□□□□□ -0.07
ATF1P18846 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC14.64□□□□□ -0.07
ATF1P18846 AC069148.1-201ENST00000608741 768 ntBASIC14.64□□□□□ -0.07
ATF1P18846 NPAP1P7-201ENST00000613027 823 ntBASIC14.64□□□□□ -0.07
ATF1P18846 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ATF1P18846 AC073592.4-201ENST00000623827 446 ntBASIC14.64□□□□□ -0.07
ATF1P18846 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
ATF1P18846 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
ATF1P18846 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
ATF1P18846 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
ATF1P18846 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ATF1P18846 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ATF1P18846 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
ATF1P18846 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.64□□□□□ -0.07
ATF1P18846 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
ATF1P18846 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ATF1P18846 GGT3P-204ENST00000453783 1664 ntBASIC14.64□□□□□ -0.07
ATF1P18846 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ATF1P18846 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ATF1P18846 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ATF1P18846 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ATF1P18846 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ATF1P18846 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
ATF1P18846 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
ATF1P18846 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ATF1P18846 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ATF1P18846 GGT4P-201ENST00000623672 1708 ntBASIC14.63□□□□□ -0.07
ATF1P18846 AL136379.1-201ENST00000623471 2642 ntBASIC14.63□□□□□ -0.07
ATF1P18846 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ATF1P18846 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
ATF1P18846 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ATF1P18846 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
ATF1P18846 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
ATF1P18846 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ATF1P18846 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ATF1P18846 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ATF1P18846 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ATF1P18846 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ATF1P18846 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
ATF1P18846 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ATF1P18846 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ATF1P18846 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
ATF1P18846 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ATF1P18846 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
ATF1P18846 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ATF1P18846 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ATF1P18846 AP002414.1-201ENST00000391405 1147 ntBASIC14.63□□□□□ -0.07
ATF1P18846 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.63□□□□□ -0.07
ATF1P18846 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
ATF1P18846 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.63□□□□□ -0.07
ATF1P18846 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ATF1P18846 AL591684.3-201ENST00000605187 298 ntBASIC14.63□□□□□ -0.07
ATF1P18846 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.63□□□□□ -0.07
ATF1P18846 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.63□□□□□ -0.07
ATF1P18846 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ATF1P18846 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ATF1P18846 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.63□□□□□ -0.07
ATF1P18846 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.63□□□□□ -0.07
ATF1P18846 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.63□□□□□ -0.07
ATF1P18846 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ATF1P18846 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.63□□□□□ -0.07
ATF1P18846 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ATF1P18846 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ATF1P18846 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ATF1P18846 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ATF1P18846 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ATF1P18846 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.63□□□□□ -0.07
ATF1P18846 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.63□□□□□ -0.07
ATF1P18846 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ATF1P18846 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
ATF1P18846 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.62□□□□□ -0.07
ATF1P18846 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ATF1P18846 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.62□□□□□ -0.07
ATF1P18846 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ATF1P18846 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.62□□□□□ -0.07
ATF1P18846 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ATF1P18846 AC006449.6-201ENST00000612330 2296 ntBASIC14.62□□□□□ -0.07
ATF1P18846 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ATF1P18846 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ATF1P18846 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ATF1P18846 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ATF1P18846 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC14.62□□□□□ -0.07
ATF1P18846 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
ATF1P18846 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.62□□□□□ -0.07
ATF1P18846 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ATF1P18846 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
ATF1P18846 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.62□□□□□ -0.07
ATF1P18846 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ATF1P18846 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC14.62□□□□□ -0.07
ATF1P18846 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms