Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RB1P06400 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RB1P06400 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.43■□□□□ 0.38
RB1P06400 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.43■□□□□ 0.38
RB1P06400 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RB1P06400 AC234783.1-201ENST00000441761 496 ntBASIC17.43■□□□□ 0.38
RB1P06400 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RB1P06400 TMEM261P1-201ENST00000604899 340 ntBASIC17.43■□□□□ 0.38
RB1P06400 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RB1P06400 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RB1P06400 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.43■□□□□ 0.38
RB1P06400 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RB1P06400 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RB1P06400 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RB1P06400 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RB1P06400 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.43■□□□□ 0.38
RB1P06400 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RB1P06400 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RB1P06400 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RB1P06400 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RB1P06400 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RB1P06400 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RB1P06400 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.42■□□□□ 0.38
RB1P06400 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RB1P06400 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RB1P06400 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RB1P06400 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RB1P06400 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RB1P06400 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RB1P06400 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.42■□□□□ 0.38
RB1P06400 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RB1P06400 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
RB1P06400 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RB1P06400 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RB1P06400 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
RB1P06400 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.42■□□□□ 0.38
RB1P06400 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
RB1P06400 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
RB1P06400 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC17.42■□□□□ 0.38
RB1P06400 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RB1P06400 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RB1P06400 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
RB1P06400 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC17.42■□□□□ 0.38
RB1P06400 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC17.42■□□□□ 0.38
RB1P06400 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC17.42■□□□□ 0.38
RB1P06400 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RB1P06400 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.42■□□□□ 0.38
RB1P06400 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.42■□□□□ 0.38
RB1P06400 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.42■□□□□ 0.38
RB1P06400 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RB1P06400 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RB1P06400 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.42■□□□□ 0.38
RB1P06400 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC17.42■□□□□ 0.38
RB1P06400 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RB1P06400 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RB1P06400 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RB1P06400 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC17.42■□□□□ 0.38
RB1P06400 AC020765.3-201ENST00000613051 740 ntBASIC17.42■□□□□ 0.38
RB1P06400 COX11-210ENST00000639671 696 ntBASIC17.42■□□□□ 0.38
RB1P06400 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RB1P06400 SNX33P1-201ENST00000592116 1762 ntBASIC17.42■□□□□ 0.38
RB1P06400 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.42■□□□□ 0.38
RB1P06400 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RB1P06400 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RB1P06400 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RB1P06400 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
RB1P06400 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.42■□□□□ 0.38
RB1P06400 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RB1P06400 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.42■□□□□ 0.38
RB1P06400 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RB1P06400 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
RB1P06400 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
RB1P06400 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
RB1P06400 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RB1P06400 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RB1P06400 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RB1P06400 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RB1P06400 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RB1P06400 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
RB1P06400 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RB1P06400 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RB1P06400 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RB1P06400 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RB1P06400 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RB1P06400 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RB1P06400 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
RB1P06400 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.41■□□□□ 0.38
RB1P06400 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.41■□□□□ 0.38
RB1P06400 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RB1P06400 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
RB1P06400 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC17.41■□□□□ 0.38
RB1P06400 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.41■□□□□ 0.38
RB1P06400 BOLA2P3-201ENST00000404566 256 ntBASIC17.41■□□□□ 0.38
RB1P06400 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC17.41■□□□□ 0.38
RB1P06400 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC17.41■□□□□ 0.38
RB1P06400 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC17.41■□□□□ 0.38
RB1P06400 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.41■□□□□ 0.38
RB1P06400 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC17.41■□□□□ 0.38
RB1P06400 AC092337.1-201ENST00000568699 1129 ntBASIC17.41■□□□□ 0.38
RB1P06400 AC133552.6-201ENST00000613406 534 ntBASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms