Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CD4P01730 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD4P01730 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD4P01730 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CD4P01730 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD4P01730 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD4P01730 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.25■□□□□ 0.51
CD4P01730 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD4P01730 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD4P01730 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD4P01730 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CD4P01730 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.25■□□□□ 0.51
CD4P01730 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CD4P01730 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD4P01730 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CD4P01730 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.25■□□□□ 0.51
CD4P01730 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD4P01730 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD4P01730 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CD4P01730 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CD4P01730 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
CD4P01730 AC079776.1-201ENST00000401540 1152 ntBASIC18.25■□□□□ 0.51
CD4P01730 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CD4P01730 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC18.25■□□□□ 0.51
CD4P01730 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.25■□□□□ 0.51
CD4P01730 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC18.25■□□□□ 0.51
CD4P01730 POLE2-203ENST00000553805 496 ntTSL 2 BASIC18.25■□□□□ 0.51
CD4P01730 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.25■□□□□ 0.51
CD4P01730 AC004790.1-201ENST00000612686 536 ntBASIC18.25■□□□□ 0.51
CD4P01730 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD4P01730 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD4P01730 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD4P01730 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.25■□□□□ 0.51
CD4P01730 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD4P01730 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.25■□□□□ 0.51
CD4P01730 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD4P01730 AL391825.1-201ENST00000457671 1364 ntBASIC18.25■□□□□ 0.51
CD4P01730 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD4P01730 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.25■□□□□ 0.51
CD4P01730 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD4P01730 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CD4P01730 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.25■□□□□ 0.51
CD4P01730 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.25■□□□□ 0.51
CD4P01730 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.25■□□□□ 0.51
CD4P01730 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.25■□□□□ 0.51
CD4P01730 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.25■□□□□ 0.51
CD4P01730 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CD4P01730 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD4P01730 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CD4P01730 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CD4P01730 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.24■□□□□ 0.51
CD4P01730 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CD4P01730 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CD4P01730 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CD4P01730 AC108860.2-201ENST00000562760 2183 ntBASIC18.24■□□□□ 0.51
CD4P01730 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CD4P01730 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CD4P01730 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CD4P01730 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CD4P01730 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CD4P01730 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CD4P01730 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CD4P01730 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CD4P01730 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.24■□□□□ 0.51
CD4P01730 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CD4P01730 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.24■□□□□ 0.51
CD4P01730 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CD4P01730 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CD4P01730 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CD4P01730 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CD4P01730 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CD4P01730 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CD4P01730 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CD4P01730 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CD4P01730 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.24■□□□□ 0.51
CD4P01730 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.24■□□□□ 0.51
CD4P01730 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18.24■□□□□ 0.51
CD4P01730 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.24■□□□□ 0.51
CD4P01730 AL162274.1-201ENST00000617191 1098 ntBASIC18.24■□□□□ 0.51
CD4P01730 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.24■□□□□ 0.51
CD4P01730 MIR6799-201ENST00000620297 69 ntBASIC18.24■□□□□ 0.51
CD4P01730 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.24■□□□□ 0.51
CD4P01730 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CD4P01730 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.24■□□□□ 0.51
CD4P01730 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.24■□□□□ 0.51
CD4P01730 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CD4P01730 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD4P01730 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.23■□□□□ 0.51
CD4P01730 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD4P01730 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.23■□□□□ 0.51
CD4P01730 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD4P01730 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CD4P01730 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CD4P01730 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD4P01730 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD4P01730 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD4P01730 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CD4P01730 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD4P01730 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.23■□□□□ 0.51
CD4P01730 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms