Protein–RNA interactions for Protein: O95970

LGI1, Leucine-rich glioma-inactivated protein 1, humanhuman

Predictions only

Length 557 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGI1O95970 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LGI1O95970 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.39■□□□□ 0.05
LGI1O95970 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LGI1O95970 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
LGI1O95970 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.39■□□□□ 0.05
LGI1O95970 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LGI1O95970 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LGI1O95970 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LGI1O95970 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LGI1O95970 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LGI1O95970 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.38■□□□□ 0.05
LGI1O95970 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
LGI1O95970 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LGI1O95970 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.38■□□□□ 0.05
LGI1O95970 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LGI1O95970 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LGI1O95970 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.38■□□□□ 0.05
LGI1O95970 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
LGI1O95970 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
LGI1O95970 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
LGI1O95970 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LGI1O95970 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.38■□□□□ 0.05
LGI1O95970 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LGI1O95970 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
LGI1O95970 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LGI1O95970 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LGI1O95970 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.38■□□□□ 0.05
LGI1O95970 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.38■□□□□ 0.05
LGI1O95970 KRT18P27-201ENST00000427733 1299 ntBASIC15.38■□□□□ 0.05
LGI1O95970 FAAHP1-202ENST00000446499 1238 ntBASIC15.38■□□□□ 0.05
LGI1O95970 AC079781.3-201ENST00000449110 356 ntBASIC15.38■□□□□ 0.05
LGI1O95970 RPS15P9-201ENST00000494093 319 ntBASIC15.38■□□□□ 0.05
LGI1O95970 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.38■□□□□ 0.05
LGI1O95970 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.38■□□□□ 0.05
LGI1O95970 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.38■□□□□ 0.05
LGI1O95970 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.38■□□□□ 0.05
LGI1O95970 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.38■□□□□ 0.05
LGI1O95970 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.38■□□□□ 0.05
LGI1O95970 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.38■□□□□ 0.05
LGI1O95970 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.38■□□□□ 0.05
LGI1O95970 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.38■□□□□ 0.05
LGI1O95970 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.38■□□□□ 0.05
LGI1O95970 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LGI1O95970 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LGI1O95970 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.38■□□□□ 0.05
LGI1O95970 GPAA1P2-202ENST00000606848 1787 ntBASIC15.38■□□□□ 0.05
LGI1O95970 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
LGI1O95970 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LGI1O95970 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.38■□□□□ 0.05
LGI1O95970 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
LGI1O95970 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.38■□□□□ 0.05
LGI1O95970 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LGI1O95970 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
LGI1O95970 AC129492.6-201ENST00000611383 1305 ntBASIC15.38■□□□□ 0.05
LGI1O95970 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LGI1O95970 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LGI1O95970 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LGI1O95970 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LGI1O95970 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.38■□□□□ 0.05
LGI1O95970 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
LGI1O95970 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
LGI1O95970 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LGI1O95970 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.37■□□□□ 0.05
LGI1O95970 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.37■□□□□ 0.05
LGI1O95970 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.37■□□□□ 0.05
LGI1O95970 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.37■□□□□ 0.05
LGI1O95970 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.37■□□□□ 0.05
LGI1O95970 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LGI1O95970 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LGI1O95970 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.37■□□□□ 0.05
LGI1O95970 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LGI1O95970 AC073621.1-201ENST00000392730 636 ntBASIC15.37■□□□□ 0.05
LGI1O95970 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LGI1O95970 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.37■□□□□ 0.05
LGI1O95970 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
LGI1O95970 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
LGI1O95970 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LGI1O95970 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.37■□□□□ 0.05
LGI1O95970 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.37■□□□□ 0.05
LGI1O95970 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.37■□□□□ 0.05
LGI1O95970 AC087641.1-201ENST00000557561 1021 ntBASIC15.37■□□□□ 0.05
LGI1O95970 AL121912.1-201ENST00000603683 238 ntBASIC15.37■□□□□ 0.05
LGI1O95970 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.37■□□□□ 0.05
LGI1O95970 AL031008.1-201ENST00000619963 541 ntBASIC15.37■□□□□ 0.05
LGI1O95970 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.37■□□□□ 0.05
LGI1O95970 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.37■□□□□ 0.05
LGI1O95970 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LGI1O95970 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
LGI1O95970 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LGI1O95970 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LGI1O95970 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.37■□□□□ 0.05
LGI1O95970 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.37■□□□□ 0.05
LGI1O95970 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.37■□□□□ 0.05
LGI1O95970 PCGF3-213ENST00000620529 1899 ntBASIC15.37■□□□□ 0.05
LGI1O95970 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.37■□□□□ 0.05
LGI1O95970 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LGI1O95970 LINC01144-201ENST00000626198 1710 ntBASIC15.37■□□□□ 0.05
LGI1O95970 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.37■□□□□ 0.05
LGI1O95970 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.37■□□□□ 0.05
LGI1O95970 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms