Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CSPG5O95196 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CSPG5O95196 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CSPG5O95196 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CSPG5O95196 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CSPG5O95196 MIR346-201ENST00000362234 95 ntBASIC17.82■□□□□ 0.44
CSPG5O95196 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CSPG5O95196 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.82■□□□□ 0.44
CSPG5O95196 PTPA-220ENST00000436883 532 ntTSL 4 BASIC17.82■□□□□ 0.44
CSPG5O95196 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CSPG5O95196 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.82■□□□□ 0.44
CSPG5O95196 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.82■□□□□ 0.44
CSPG5O95196 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC17.82■□□□□ 0.44
CSPG5O95196 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CSPG5O95196 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.82■□□□□ 0.44
CSPG5O95196 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CSPG5O95196 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CSPG5O95196 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CSPG5O95196 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
CSPG5O95196 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
CSPG5O95196 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CSPG5O95196 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSPG5O95196 PRORSD1P-202ENST00000563365 2154 ntBASIC17.81■□□□□ 0.44
CSPG5O95196 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CSPG5O95196 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CSPG5O95196 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.81■□□□□ 0.44
CSPG5O95196 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSPG5O95196 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSPG5O95196 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSPG5O95196 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.81■□□□□ 0.44
CSPG5O95196 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CSPG5O95196 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
CSPG5O95196 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
CSPG5O95196 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSPG5O95196 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSPG5O95196 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSPG5O95196 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CSPG5O95196 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CSPG5O95196 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSPG5O95196 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.81■□□□□ 0.44
CSPG5O95196 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CSPG5O95196 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CSPG5O95196 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.81■□□□□ 0.44
CSPG5O95196 HILS1-202ENST00000545329 423 ntBASIC17.81■□□□□ 0.44
CSPG5O95196 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CSPG5O95196 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSPG5O95196 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.81■□□□□ 0.44
CSPG5O95196 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSPG5O95196 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CSPG5O95196 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.81■□□□□ 0.44
CSPG5O95196 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSPG5O95196 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
CSPG5O95196 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSPG5O95196 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.81■□□□□ 0.44
CSPG5O95196 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSPG5O95196 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSPG5O95196 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSPG5O95196 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CSPG5O95196 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSPG5O95196 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.81■□□□□ 0.44
CSPG5O95196 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CSPG5O95196 AC131009.4-201ENST00000624048 1740 ntBASIC17.81■□□□□ 0.44
CSPG5O95196 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.81■□□□□ 0.44
CSPG5O95196 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CSPG5O95196 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CSPG5O95196 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CSPG5O95196 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CSPG5O95196 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CSPG5O95196 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CSPG5O95196 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CSPG5O95196 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.8■□□□□ 0.44
CSPG5O95196 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CSPG5O95196 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CSPG5O95196 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.8■□□□□ 0.44
CSPG5O95196 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CSPG5O95196 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CSPG5O95196 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CSPG5O95196 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CSPG5O95196 HLA-V-201ENST00000429037 534 ntBASIC17.8■□□□□ 0.44
CSPG5O95196 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.8■□□□□ 0.44
CSPG5O95196 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.8■□□□□ 0.44
CSPG5O95196 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.8■□□□□ 0.44
CSPG5O95196 AL132655.2-201ENST00000596276 594 ntBASIC17.8■□□□□ 0.44
CSPG5O95196 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.8■□□□□ 0.44
CSPG5O95196 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
CSPG5O95196 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CSPG5O95196 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
CSPG5O95196 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CSPG5O95196 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.8■□□□□ 0.44
CSPG5O95196 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CSPG5O95196 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.8■□□□□ 0.44
CSPG5O95196 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.8■□□□□ 0.44
CSPG5O95196 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CSPG5O95196 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.8■□□□□ 0.44
CSPG5O95196 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CSPG5O95196 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CSPG5O95196 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CSPG5O95196 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CSPG5O95196 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CSPG5O95196 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms