Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEF11O60813 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEF11O60813 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEF11O60813 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEF11O60813 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEF11O60813 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
PRAMEF11O60813 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.81■□□□□ 0.28
PRAMEF11O60813 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEF11O60813 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEF11O60813 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PRAMEF11O60813 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEF11O60813 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.81■□□□□ 0.28
PRAMEF11O60813 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEF11O60813 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
PRAMEF11O60813 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.81■□□□□ 0.28
PRAMEF11O60813 AC084018.2-201ENST00000613093 2607 ntBASIC16.81■□□□□ 0.28
PRAMEF11O60813 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEF11O60813 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEF11O60813 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
PRAMEF11O60813 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.81■□□□□ 0.28
PRAMEF11O60813 SPCS2P4-201ENST00000436160 681 ntBASIC16.81■□□□□ 0.28
PRAMEF11O60813 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.81■□□□□ 0.28
PRAMEF11O60813 AP006288.1-201ENST00000446065 395 ntBASIC16.81■□□□□ 0.28
PRAMEF11O60813 AC004967.1-201ENST00000453589 447 ntBASIC16.81■□□□□ 0.28
PRAMEF11O60813 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.81■□□□□ 0.28
PRAMEF11O60813 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.81■□□□□ 0.28
PRAMEF11O60813 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.81■□□□□ 0.28
PRAMEF11O60813 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
PRAMEF11O60813 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.81■□□□□ 0.28
PRAMEF11O60813 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.81■□□□□ 0.28
PRAMEF11O60813 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.81■□□□□ 0.28
PRAMEF11O60813 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.81■□□□□ 0.28
PRAMEF11O60813 AC008267.7-201ENST00000624570 1194 ntBASIC16.81■□□□□ 0.28
PRAMEF11O60813 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEF11O60813 AC005052.1-201ENST00000625181 2492 ntBASIC16.81■□□□□ 0.28
PRAMEF11O60813 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEF11O60813 AC073439.1-201ENST00000624121 1774 ntBASIC16.81■□□□□ 0.28
PRAMEF11O60813 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEF11O60813 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.81■□□□□ 0.28
PRAMEF11O60813 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
PRAMEF11O60813 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEF11O60813 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
PRAMEF11O60813 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEF11O60813 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEF11O60813 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.81■□□□□ 0.28
PRAMEF11O60813 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEF11O60813 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEF11O60813 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEF11O60813 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PRAMEF11O60813 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PRAMEF11O60813 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.8■□□□□ 0.28
PRAMEF11O60813 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PRAMEF11O60813 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PRAMEF11O60813 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
PRAMEF11O60813 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEF11O60813 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEF11O60813 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEF11O60813 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEF11O60813 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEF11O60813 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEF11O60813 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PRAMEF11O60813 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEF11O60813 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PRAMEF11O60813 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.8■□□□□ 0.28
PRAMEF11O60813 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEF11O60813 POU5F1P6-201ENST00000466990 990 ntBASIC16.8■□□□□ 0.28
PRAMEF11O60813 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEF11O60813 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.8■□□□□ 0.28
PRAMEF11O60813 PRYP6-201ENST00000514804 343 ntBASIC16.8■□□□□ 0.28
PRAMEF11O60813 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.8■□□□□ 0.28
PRAMEF11O60813 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.8■□□□□ 0.28
PRAMEF11O60813 LINC01225-203ENST00000563550 1244 ntBASIC16.8■□□□□ 0.28
PRAMEF11O60813 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
PRAMEF11O60813 AC073389.1-201ENST00000595595 795 ntBASIC16.8■□□□□ 0.28
PRAMEF11O60813 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.8■□□□□ 0.28
PRAMEF11O60813 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.8■□□□□ 0.28
PRAMEF11O60813 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.8■□□□□ 0.28
PRAMEF11O60813 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.8■□□□□ 0.28
PRAMEF11O60813 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEF11O60813 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEF11O60813 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEF11O60813 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEF11O60813 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PRAMEF11O60813 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEF11O60813 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.8■□□□□ 0.28
PRAMEF11O60813 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRAMEF11O60813 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.79■□□□□ 0.28
PRAMEF11O60813 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.79■□□□□ 0.28
PRAMEF11O60813 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.79■□□□□ 0.28
PRAMEF11O60813 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
PRAMEF11O60813 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRAMEF11O60813 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PRAMEF11O60813 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
PRAMEF11O60813 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PRAMEF11O60813 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRAMEF11O60813 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRAMEF11O60813 AC093724.1-201ENST00000448659 1027 ntBASIC16.79■□□□□ 0.28
PRAMEF11O60813 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.79■□□□□ 0.28
PRAMEF11O60813 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
PRAMEF11O60813 AP000344.2-201ENST00000512987 629 ntBASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms