Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.88■□□□□ 0.13
LCMT2O60294 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.88■□□□□ 0.13
LCMT2O60294 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LCMT2O60294 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.88■□□□□ 0.13
LCMT2O60294 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
LCMT2O60294 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LCMT2O60294 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.88■□□□□ 0.13
LCMT2O60294 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LCMT2O60294 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.88■□□□□ 0.13
LCMT2O60294 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.88■□□□□ 0.13
LCMT2O60294 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.88■□□□□ 0.13
LCMT2O60294 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LCMT2O60294 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.88■□□□□ 0.13
LCMT2O60294 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.88■□□□□ 0.13
LCMT2O60294 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.88■□□□□ 0.13
LCMT2O60294 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.88■□□□□ 0.13
LCMT2O60294 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.88■□□□□ 0.13
LCMT2O60294 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.88■□□□□ 0.13
LCMT2O60294 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.88■□□□□ 0.13
LCMT2O60294 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.88■□□□□ 0.13
LCMT2O60294 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LCMT2O60294 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LCMT2O60294 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.88■□□□□ 0.13
LCMT2O60294 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.88■□□□□ 0.13
LCMT2O60294 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.88■□□□□ 0.13
LCMT2O60294 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
LCMT2O60294 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LCMT2O60294 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LCMT2O60294 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
LCMT2O60294 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
LCMT2O60294 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.88■□□□□ 0.13
LCMT2O60294 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.88■□□□□ 0.13
LCMT2O60294 AL118508.1-201ENST00000613502 2345 ntBASIC15.88■□□□□ 0.13
LCMT2O60294 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LCMT2O60294 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LCMT2O60294 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.87■□□□□ 0.13
LCMT2O60294 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.87■□□□□ 0.13
LCMT2O60294 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LCMT2O60294 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LCMT2O60294 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
LCMT2O60294 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
LCMT2O60294 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LCMT2O60294 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
LCMT2O60294 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LCMT2O60294 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.87■□□□□ 0.13
LCMT2O60294 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
LCMT2O60294 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LCMT2O60294 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.87■□□□□ 0.13
LCMT2O60294 AC016027.1-202ENST00000607927 1699 ntBASIC15.87■□□□□ 0.13
LCMT2O60294 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.87■□□□□ 0.13
LCMT2O60294 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.87■□□□□ 0.13
LCMT2O60294 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LCMT2O60294 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LCMT2O60294 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.87■□□□□ 0.13
LCMT2O60294 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
LCMT2O60294 RPSAP43-201ENST00000402237 625 ntBASIC15.87■□□□□ 0.13
LCMT2O60294 BX842568.4-201ENST00000421222 227 ntBASIC15.87■□□□□ 0.13
LCMT2O60294 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.87■□□□□ 0.13
LCMT2O60294 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.87■□□□□ 0.13
LCMT2O60294 HTR5BP-201ENST00000430851 1154 ntBASIC15.87■□□□□ 0.13
LCMT2O60294 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.87■□□□□ 0.13
LCMT2O60294 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.87■□□□□ 0.13
LCMT2O60294 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.87■□□□□ 0.13
LCMT2O60294 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
LCMT2O60294 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.87■□□□□ 0.13
LCMT2O60294 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.87■□□□□ 0.13
LCMT2O60294 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.87■□□□□ 0.13
LCMT2O60294 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
LCMT2O60294 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LCMT2O60294 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
LCMT2O60294 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
LCMT2O60294 AC010327.4-202ENST00000591484 748 ntBASIC15.87■□□□□ 0.13
LCMT2O60294 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.87■□□□□ 0.13
LCMT2O60294 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LCMT2O60294 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
LCMT2O60294 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LCMT2O60294 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LCMT2O60294 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
LCMT2O60294 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
LCMT2O60294 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
LCMT2O60294 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LCMT2O60294 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
LCMT2O60294 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.87■□□□□ 0.13
LCMT2O60294 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LCMT2O60294 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LCMT2O60294 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.87■□□□□ 0.13
LCMT2O60294 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
LCMT2O60294 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
LCMT2O60294 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LCMT2O60294 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
LCMT2O60294 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LCMT2O60294 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LCMT2O60294 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.86■□□□□ 0.13
LCMT2O60294 PCGF3-213ENST00000620529 1899 ntBASIC15.86■□□□□ 0.13
LCMT2O60294 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
LCMT2O60294 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
LCMT2O60294 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
LCMT2O60294 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LCMT2O60294 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
LCMT2O60294 ME2P1-201ENST00000426028 1970 ntBASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms