Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 NSUN5P2-203ENST00000457352 1529 ntBASIC15.36■□□□□ 0.05
IDH3BO43837 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.36■□□□□ 0.05
IDH3BO43837 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
IDH3BO43837 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.36■□□□□ 0.05
IDH3BO43837 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
IDH3BO43837 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.36■□□□□ 0.05
IDH3BO43837 AL021920.2-201ENST00000624828 1351 ntBASIC15.36■□□□□ 0.05
IDH3BO43837 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
IDH3BO43837 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
IDH3BO43837 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
IDH3BO43837 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
IDH3BO43837 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
IDH3BO43837 SIGLEC16-201ENST00000599858 1437 ntBASIC15.35■□□□□ 0.05
IDH3BO43837 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.35■□□□□ 0.05
IDH3BO43837 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.35■□□□□ 0.05
IDH3BO43837 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
IDH3BO43837 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
IDH3BO43837 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
IDH3BO43837 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
IDH3BO43837 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
IDH3BO43837 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.35■□□□□ 0.05
IDH3BO43837 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.35■□□□□ 0.05
IDH3BO43837 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
IDH3BO43837 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.35■□□□□ 0.05
IDH3BO43837 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
IDH3BO43837 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
IDH3BO43837 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
IDH3BO43837 RCN1P2-201ENST00000398357 915 ntBASIC15.35■□□□□ 0.05
IDH3BO43837 SPDYE21P-201ENST00000413323 827 ntBASIC15.35■□□□□ 0.05
IDH3BO43837 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
IDH3BO43837 IGHV3-47-201ENST00000425060 335 ntBASIC15.35■□□□□ 0.05
IDH3BO43837 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
IDH3BO43837 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.35■□□□□ 0.05
IDH3BO43837 AC096582.2-201ENST00000510860 516 ntBASIC15.35■□□□□ 0.05
IDH3BO43837 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.35■□□□□ 0.05
IDH3BO43837 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
IDH3BO43837 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
IDH3BO43837 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
IDH3BO43837 AC114341.1-201ENST00000618070 349 ntBASIC15.35■□□□□ 0.05
IDH3BO43837 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
IDH3BO43837 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.35■□□□□ 0.05
IDH3BO43837 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.35■□□□□ 0.05
IDH3BO43837 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.35■□□□□ 0.05
IDH3BO43837 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
IDH3BO43837 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC15.35■□□□□ 0.05
IDH3BO43837 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
IDH3BO43837 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
IDH3BO43837 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
IDH3BO43837 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
IDH3BO43837 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
IDH3BO43837 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.35■□□□□ 0.05
IDH3BO43837 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
IDH3BO43837 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
IDH3BO43837 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
IDH3BO43837 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
IDH3BO43837 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
IDH3BO43837 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
IDH3BO43837 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
IDH3BO43837 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
IDH3BO43837 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IDH3BO43837 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
IDH3BO43837 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.34■□□□□ 0.05
IDH3BO43837 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IDH3BO43837 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IDH3BO43837 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.34■□□□□ 0.05
IDH3BO43837 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
IDH3BO43837 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
IDH3BO43837 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
IDH3BO43837 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.34■□□□□ 0.05
IDH3BO43837 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.34■□□□□ 0.05
IDH3BO43837 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
IDH3BO43837 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
IDH3BO43837 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IDH3BO43837 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IDH3BO43837 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IDH3BO43837 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
IDH3BO43837 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.34■□□□□ 0.05
IDH3BO43837 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IDH3BO43837 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC15.34■□□□□ 0.05
IDH3BO43837 AP002383.4-201ENST00000442518 975 ntBASIC15.34■□□□□ 0.05
IDH3BO43837 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
IDH3BO43837 TOB2P1-201ENST00000469761 992 ntBASIC15.34■□□□□ 0.05
IDH3BO43837 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
IDH3BO43837 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IDH3BO43837 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
IDH3BO43837 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
IDH3BO43837 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
IDH3BO43837 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.34■□□□□ 0.05
IDH3BO43837 AC067930.6-201ENST00000623257 4947 ntBASIC15.34■□□□□ 0.05
IDH3BO43837 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC15.34■□□□□ 0.05
IDH3BO43837 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.34■□□□□ 0.05
IDH3BO43837 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IDH3BO43837 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IDH3BO43837 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IDH3BO43837 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
IDH3BO43837 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC15.34■□□□□ 0.05
IDH3BO43837 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
IDH3BO43837 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
IDH3BO43837 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
IDH3BO43837 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms