Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SEMA3EO15041 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.87■□□□□ 0.77
SEMA3EO15041 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.87■□□□□ 0.77
SEMA3EO15041 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SEMA3EO15041 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SEMA3EO15041 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SEMA3EO15041 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
SEMA3EO15041 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SEMA3EO15041 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SEMA3EO15041 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SEMA3EO15041 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SEMA3EO15041 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SEMA3EO15041 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC19.86■□□□□ 0.77
SEMA3EO15041 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SEMA3EO15041 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SEMA3EO15041 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
SEMA3EO15041 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
SEMA3EO15041 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
SEMA3EO15041 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SEMA3EO15041 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SEMA3EO15041 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SEMA3EO15041 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SEMA3EO15041 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SEMA3EO15041 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SEMA3EO15041 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
SEMA3EO15041 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC19.86■□□□□ 0.77
SEMA3EO15041 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC19.86■□□□□ 0.77
SEMA3EO15041 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC19.86■□□□□ 0.77
SEMA3EO15041 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SEMA3EO15041 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC19.86■□□□□ 0.77
SEMA3EO15041 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC19.86■□□□□ 0.77
SEMA3EO15041 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC19.86■□□□□ 0.77
SEMA3EO15041 AC138761.1-201ENST00000584393 385 ntBASIC19.86■□□□□ 0.77
SEMA3EO15041 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SEMA3EO15041 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.86■□□□□ 0.77
SEMA3EO15041 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SEMA3EO15041 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SEMA3EO15041 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SEMA3EO15041 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SEMA3EO15041 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SEMA3EO15041 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.86■□□□□ 0.77
SEMA3EO15041 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.86■□□□□ 0.77
SEMA3EO15041 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC19.85■□□□□ 0.77
SEMA3EO15041 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SEMA3EO15041 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SEMA3EO15041 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SEMA3EO15041 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
SEMA3EO15041 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SEMA3EO15041 AC078925.2-201ENST00000624013 1973 ntBASIC19.85■□□□□ 0.77
SEMA3EO15041 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SEMA3EO15041 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
SEMA3EO15041 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC19.85■□□□□ 0.77
SEMA3EO15041 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
SEMA3EO15041 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SEMA3EO15041 AL035633.1-201ENST00000406139 838 ntBASIC19.85■□□□□ 0.77
SEMA3EO15041 RAC2-204ENST00000406508 893 ntTSL 5 BASIC19.85■□□□□ 0.77
SEMA3EO15041 STK33P1-201ENST00000423835 1218 ntBASIC19.85■□□□□ 0.77
SEMA3EO15041 AC002472.2-201ENST00000442739 958 ntBASIC19.85■□□□□ 0.77
SEMA3EO15041 LHX6-205ENST00000464484 666 ntTSL 2 BASIC19.85■□□□□ 0.77
SEMA3EO15041 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC19.85■□□□□ 0.77
SEMA3EO15041 RN7SL204P-201ENST00000582831 262 ntBASIC19.85■□□□□ 0.77
SEMA3EO15041 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SEMA3EO15041 RAB34-223ENST00000636154 730 ntTSL 2 BASIC19.85■□□□□ 0.77
SEMA3EO15041 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
SEMA3EO15041 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.85■□□□□ 0.77
SEMA3EO15041 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SEMA3EO15041 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SEMA3EO15041 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SEMA3EO15041 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC19.85■□□□□ 0.77
SEMA3EO15041 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
SEMA3EO15041 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SEMA3EO15041 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SEMA3EO15041 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
SEMA3EO15041 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SEMA3EO15041 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
SEMA3EO15041 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SEMA3EO15041 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SEMA3EO15041 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
SEMA3EO15041 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SEMA3EO15041 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC19.84■□□□□ 0.77
SEMA3EO15041 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SEMA3EO15041 HLA-A-202ENST00000376806 1854 ntBASIC19.84■□□□□ 0.77
SEMA3EO15041 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SEMA3EO15041 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC19.84■□□□□ 0.77
SEMA3EO15041 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
SEMA3EO15041 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SEMA3EO15041 MIR661-201ENST00000384842 89 ntBASIC19.84■□□□□ 0.77
SEMA3EO15041 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SEMA3EO15041 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC19.84■□□□□ 0.77
SEMA3EO15041 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SEMA3EO15041 MPI-209ENST00000564003 1195 ntTSL 2 BASIC19.84■□□□□ 0.77
SEMA3EO15041 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SEMA3EO15041 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC19.84■□□□□ 0.77
SEMA3EO15041 AL589739.1-201ENST00000607720 493 ntBASIC19.84■□□□□ 0.77
SEMA3EO15041 TEX28P1-201ENST00000613479 1221 ntBASIC19.84■□□□□ 0.77
SEMA3EO15041 TEX28P2-201ENST00000617764 1221 ntBASIC19.84■□□□□ 0.77
SEMA3EO15041 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
SEMA3EO15041 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SEMA3EO15041 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SEMA3EO15041 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms