Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC188H7C350 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC188H7C350 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC188H7C350 TSSC2-201ENST00000450217 709 ntBASIC17.32■□□□□ 0.36
CCDC188H7C350 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC188H7C350 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.32■□□□□ 0.36
CCDC188H7C350 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CCDC188H7C350 AC010654.1-201ENST00000615722 808 ntBASIC17.32■□□□□ 0.36
CCDC188H7C350 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CCDC188H7C350 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC188H7C350 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.32■□□□□ 0.36
CCDC188H7C350 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC188H7C350 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC188H7C350 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CCDC188H7C350 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC188H7C350 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CCDC188H7C350 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC188H7C350 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC188H7C350 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CCDC188H7C350 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CCDC188H7C350 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CCDC188H7C350 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC188H7C350 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CCDC188H7C350 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC188H7C350 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC188H7C350 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC188H7C350 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC188H7C350 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC188H7C350 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.31■□□□□ 0.36
CCDC188H7C350 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC188H7C350 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
CCDC188H7C350 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC188H7C350 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC188H7C350 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CCDC188H7C350 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC188H7C350 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC188H7C350 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC188H7C350 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC188H7C350 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC188H7C350 AC131009.4-201ENST00000624048 1740 ntBASIC17.31■□□□□ 0.36
CCDC188H7C350 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
CCDC188H7C350 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC188H7C350 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
CCDC188H7C350 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.31■□□□□ 0.36
CCDC188H7C350 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC188H7C350 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC188H7C350 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.31■□□□□ 0.36
CCDC188H7C350 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.31■□□□□ 0.36
CCDC188H7C350 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.31■□□□□ 0.36
CCDC188H7C350 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
CCDC188H7C350 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC188H7C350 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC188H7C350 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC188H7C350 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.31■□□□□ 0.36
CCDC188H7C350 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.31■□□□□ 0.36
CCDC188H7C350 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC188H7C350 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC188H7C350 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
CCDC188H7C350 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC188H7C350 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC188H7C350 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC188H7C350 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CCDC188H7C350 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC188H7C350 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC188H7C350 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.31■□□□□ 0.36
CCDC188H7C350 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC188H7C350 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.31■□□□□ 0.36
CCDC188H7C350 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC188H7C350 AC069224.1-201ENST00000566372 1715 ntBASIC17.3■□□□□ 0.36
CCDC188H7C350 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CCDC188H7C350 AC005332.1-201ENST00000577698 1310 ntBASIC17.3■□□□□ 0.36
CCDC188H7C350 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC188H7C350 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CCDC188H7C350 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CCDC188H7C350 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC188H7C350 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC188H7C350 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC188H7C350 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.3■□□□□ 0.36
CCDC188H7C350 MIR648-201ENST00000385046 94 ntBASIC17.3■□□□□ 0.36
CCDC188H7C350 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC188H7C350 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.3■□□□□ 0.36
CCDC188H7C350 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC188H7C350 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC188H7C350 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CCDC188H7C350 AC092329.2-201ENST00000598402 547 ntBASIC17.3■□□□□ 0.36
CCDC188H7C350 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC188H7C350 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC188H7C350 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC188H7C350 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CCDC188H7C350 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CCDC188H7C350 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC188H7C350 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC188H7C350 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC188H7C350 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC188H7C350 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC188H7C350 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC188H7C350 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC188H7C350 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CCDC188H7C350 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC188H7C350 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms